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Predicting need for heart failure advanced therapies using an interpretable tropical geometry-based fuzzy neural network

BACKGROUND: Timely referral for advanced therapies (i.e., heart transplantation, left ventricular assist device) is critical for ensuring optimal outcomes for heart failure patients. Using electronic health records, our goal was to use data from a single hospitalization to develop an interpretable c...

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Autores principales: Zhang, Yufeng, Aaronson, Keith D., Gryak, Jonathan, Wittrup, Emily, Minoccheri, Cristian, Golbus, Jessica R., Najarian, Kayvan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10684094/
https://www.ncbi.nlm.nih.gov/pubmed/38015947
http://dx.doi.org/10.1371/journal.pone.0295016
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author Zhang, Yufeng
Aaronson, Keith D.
Gryak, Jonathan
Wittrup, Emily
Minoccheri, Cristian
Golbus, Jessica R.
Najarian, Kayvan
author_facet Zhang, Yufeng
Aaronson, Keith D.
Gryak, Jonathan
Wittrup, Emily
Minoccheri, Cristian
Golbus, Jessica R.
Najarian, Kayvan
author_sort Zhang, Yufeng
collection PubMed
description BACKGROUND: Timely referral for advanced therapies (i.e., heart transplantation, left ventricular assist device) is critical for ensuring optimal outcomes for heart failure patients. Using electronic health records, our goal was to use data from a single hospitalization to develop an interpretable clinical decision-making system for predicting the need for advanced therapies at the subsequent hospitalization. METHODS: Michigan Medicine heart failure patients from 2013–2021 with a left ventricular ejection fraction ≤ 35% and at least two heart failure hospitalizations within one year were used to train an interpretable machine learning model constructed using fuzzy logic and tropical geometry. Clinical knowledge was used to initialize the model. The performance and robustness of the model were evaluated with the mean and standard deviation of the area under the receiver operating curve (AUC), the area under the precision-recall curve (AUPRC), and the F1 score of the ensemble. We inferred membership functions from the model for continuous clinical variables, extracted decision rules, and then evaluated their relative importance. RESULTS: The model was trained and validated using data from 557 heart failure hospitalizations from 300 patients, of whom 193 received advanced therapies. The mean (standard deviation) of AUC, AUPRC, and F1 scores of the proposed model initialized with clinical knowledge was 0.747 (0.080), 0.642 (0.080), and 0.569 (0.067), respectively, showing superior predictive performance or increased interpretability over other machine learning methods. The model learned critical risk factors predicting the need for advanced therapies in the subsequent hospitalization. Furthermore, our model displayed transparent rule sets composed of these critical concepts to justify the prediction. CONCLUSION: These results demonstrate the ability to successfully predict the need for advanced heart failure therapies by generating transparent and accessible clinical rules although further research is needed to prospectively validate the risk factors identified by the model.
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spelling pubmed-106840942023-11-30 Predicting need for heart failure advanced therapies using an interpretable tropical geometry-based fuzzy neural network Zhang, Yufeng Aaronson, Keith D. Gryak, Jonathan Wittrup, Emily Minoccheri, Cristian Golbus, Jessica R. Najarian, Kayvan PLoS One Research Article BACKGROUND: Timely referral for advanced therapies (i.e., heart transplantation, left ventricular assist device) is critical for ensuring optimal outcomes for heart failure patients. Using electronic health records, our goal was to use data from a single hospitalization to develop an interpretable clinical decision-making system for predicting the need for advanced therapies at the subsequent hospitalization. METHODS: Michigan Medicine heart failure patients from 2013–2021 with a left ventricular ejection fraction ≤ 35% and at least two heart failure hospitalizations within one year were used to train an interpretable machine learning model constructed using fuzzy logic and tropical geometry. Clinical knowledge was used to initialize the model. The performance and robustness of the model were evaluated with the mean and standard deviation of the area under the receiver operating curve (AUC), the area under the precision-recall curve (AUPRC), and the F1 score of the ensemble. We inferred membership functions from the model for continuous clinical variables, extracted decision rules, and then evaluated their relative importance. RESULTS: The model was trained and validated using data from 557 heart failure hospitalizations from 300 patients, of whom 193 received advanced therapies. The mean (standard deviation) of AUC, AUPRC, and F1 scores of the proposed model initialized with clinical knowledge was 0.747 (0.080), 0.642 (0.080), and 0.569 (0.067), respectively, showing superior predictive performance or increased interpretability over other machine learning methods. The model learned critical risk factors predicting the need for advanced therapies in the subsequent hospitalization. Furthermore, our model displayed transparent rule sets composed of these critical concepts to justify the prediction. CONCLUSION: These results demonstrate the ability to successfully predict the need for advanced heart failure therapies by generating transparent and accessible clinical rules although further research is needed to prospectively validate the risk factors identified by the model. Public Library of Science 2023-11-28 /pmc/articles/PMC10684094/ /pubmed/38015947 http://dx.doi.org/10.1371/journal.pone.0295016 Text en © 2023 Zhang et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Zhang, Yufeng
Aaronson, Keith D.
Gryak, Jonathan
Wittrup, Emily
Minoccheri, Cristian
Golbus, Jessica R.
Najarian, Kayvan
Predicting need for heart failure advanced therapies using an interpretable tropical geometry-based fuzzy neural network
title Predicting need for heart failure advanced therapies using an interpretable tropical geometry-based fuzzy neural network
title_full Predicting need for heart failure advanced therapies using an interpretable tropical geometry-based fuzzy neural network
title_fullStr Predicting need for heart failure advanced therapies using an interpretable tropical geometry-based fuzzy neural network
title_full_unstemmed Predicting need for heart failure advanced therapies using an interpretable tropical geometry-based fuzzy neural network
title_short Predicting need for heart failure advanced therapies using an interpretable tropical geometry-based fuzzy neural network
title_sort predicting need for heart failure advanced therapies using an interpretable tropical geometry-based fuzzy neural network
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10684094/
https://www.ncbi.nlm.nih.gov/pubmed/38015947
http://dx.doi.org/10.1371/journal.pone.0295016
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