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The MAGMA pipeline for comprehensive genomic analyses of clinical Mycobacterium tuberculosis samples
BACKGROUND: Whole genome sequencing (WGS) holds great potential for the management and control of tuberculosis. Accurate analysis of samples with low mycobacterial burden, which are characterized by low (<20x) coverage and high (>40%) levels of contamination, is challenging. We created the MAG...
Autores principales: | Heupink, Tim H., Verboven, Lennert, Sharma, Abhinav, Rennie, Vincent, de Diego Fuertes, Miguel, Warren, Robin M., Van Rie, Annelies |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10686480/ https://www.ncbi.nlm.nih.gov/pubmed/38019772 http://dx.doi.org/10.1371/journal.pcbi.1011648 |
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