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Genome-wide association studies on coronary artery disease: A systematic review and implications for populations of different ancestries

BACKGROUND: Cardiovascular diseases are some of the leading causes of death worldwide, with coronary artery disease leading as one of the primary causes of mortality in both the developing and developed worlds. Despite its prevalence, there is a disproportionately small number of studies conducted i...

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Autores principales: Silva, Sarah, Nitsch, Dorothea, Fatumo, Segun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10686512/
https://www.ncbi.nlm.nih.gov/pubmed/38019802
http://dx.doi.org/10.1371/journal.pone.0294341
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author Silva, Sarah
Nitsch, Dorothea
Fatumo, Segun
author_facet Silva, Sarah
Nitsch, Dorothea
Fatumo, Segun
author_sort Silva, Sarah
collection PubMed
description BACKGROUND: Cardiovascular diseases are some of the leading causes of death worldwide, with coronary artery disease leading as one of the primary causes of mortality in both the developing and developed worlds. Despite its prevalence, there is a disproportionately small number of studies conducted in populations of non-European ancestry, with the limited sample sizes of such studies further restricting the power and generalizability of respective findings. This research aimed at understanding the differences in the genetic architecture of coronary artery disease (CAD) in populations of diverse ancestries in order to contribute towards the understanding of the pathophysiology of coronary artery disease. METHODS: We performed a systematic review on the 6(th) of October, 2022 summarizing genome-wide association studies on coronary artery disease, while employing the GWAS Catalog as an independent database to support the search. We developed a framework to assess the methodological quality of each study. We extracted and grouped associated single nucleotide polymorphisms and genes according to ancestry groups of participants. RESULTS: We identified 3100 studies, of which, 36 relevant studies were included in this research. Three of the studies that were included were not listed in the GWAS Catalog, highlighting the value of conducting an independent search alongside established databases in order to ensure the full research landscape has been captured. 743,919 CAD case participants from 25 different countries were analysed, with 61% of the studies identified in this research conducted in populations of European ancestry. No studies investigated populations of Africans living in continental Africa or admixed American ancestry groups besides African-Americans, while limited sample sizes were included of population groups besides Europeans and East Asians. This observed disproportionate population representation highlights the gaps in the literature, which limits our ability to understand coronary artery disease as a global disease. 71 genetic loci were identified to be associated with coronary artery disease in more than one article, with ancestry-specific genetic loci identified in each respective population group which were not detected in studies of other ancestries. CONCLUSIONS: Although the replication and validation of these variants are still warranted, these finding are indicative of the value of including diverse ancestry populations in GWAS reference panels, as a more comprehensive understanding of the genetic architecture and pathophysiology of CAD can be achieved.
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spelling pubmed-106865122023-11-30 Genome-wide association studies on coronary artery disease: A systematic review and implications for populations of different ancestries Silva, Sarah Nitsch, Dorothea Fatumo, Segun PLoS One Research Article BACKGROUND: Cardiovascular diseases are some of the leading causes of death worldwide, with coronary artery disease leading as one of the primary causes of mortality in both the developing and developed worlds. Despite its prevalence, there is a disproportionately small number of studies conducted in populations of non-European ancestry, with the limited sample sizes of such studies further restricting the power and generalizability of respective findings. This research aimed at understanding the differences in the genetic architecture of coronary artery disease (CAD) in populations of diverse ancestries in order to contribute towards the understanding of the pathophysiology of coronary artery disease. METHODS: We performed a systematic review on the 6(th) of October, 2022 summarizing genome-wide association studies on coronary artery disease, while employing the GWAS Catalog as an independent database to support the search. We developed a framework to assess the methodological quality of each study. We extracted and grouped associated single nucleotide polymorphisms and genes according to ancestry groups of participants. RESULTS: We identified 3100 studies, of which, 36 relevant studies were included in this research. Three of the studies that were included were not listed in the GWAS Catalog, highlighting the value of conducting an independent search alongside established databases in order to ensure the full research landscape has been captured. 743,919 CAD case participants from 25 different countries were analysed, with 61% of the studies identified in this research conducted in populations of European ancestry. No studies investigated populations of Africans living in continental Africa or admixed American ancestry groups besides African-Americans, while limited sample sizes were included of population groups besides Europeans and East Asians. This observed disproportionate population representation highlights the gaps in the literature, which limits our ability to understand coronary artery disease as a global disease. 71 genetic loci were identified to be associated with coronary artery disease in more than one article, with ancestry-specific genetic loci identified in each respective population group which were not detected in studies of other ancestries. CONCLUSIONS: Although the replication and validation of these variants are still warranted, these finding are indicative of the value of including diverse ancestry populations in GWAS reference panels, as a more comprehensive understanding of the genetic architecture and pathophysiology of CAD can be achieved. Public Library of Science 2023-11-29 /pmc/articles/PMC10686512/ /pubmed/38019802 http://dx.doi.org/10.1371/journal.pone.0294341 Text en © 2023 Silva et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Silva, Sarah
Nitsch, Dorothea
Fatumo, Segun
Genome-wide association studies on coronary artery disease: A systematic review and implications for populations of different ancestries
title Genome-wide association studies on coronary artery disease: A systematic review and implications for populations of different ancestries
title_full Genome-wide association studies on coronary artery disease: A systematic review and implications for populations of different ancestries
title_fullStr Genome-wide association studies on coronary artery disease: A systematic review and implications for populations of different ancestries
title_full_unstemmed Genome-wide association studies on coronary artery disease: A systematic review and implications for populations of different ancestries
title_short Genome-wide association studies on coronary artery disease: A systematic review and implications for populations of different ancestries
title_sort genome-wide association studies on coronary artery disease: a systematic review and implications for populations of different ancestries
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10686512/
https://www.ncbi.nlm.nih.gov/pubmed/38019802
http://dx.doi.org/10.1371/journal.pone.0294341
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