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Deep-learning-based survival prediction of patients with lower limb melanoma

BACKGROUND: For the purpose to examine lower limb melanoma (LLM) and its long-term survival rate, we used data from the Surveillance, Epidemiology and End Results (SEER) database. To estimate the prognosis of LLM patients and assess its efficacy, we used a powerful deep learning and neural network a...

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Autores principales: Zhang, Jinrong, Yu, Hai, Zheng, Xinkai, Ming, Wai-kit, Lak, Yau Sun, Tom, Kong Ching, Lee, Alice, Huang, Hui, Chen, Wenhui, Lyu, Jun, Deng, Liehua
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer US 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10686915/
https://www.ncbi.nlm.nih.gov/pubmed/38030951
http://dx.doi.org/10.1007/s12672-023-00823-y
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author Zhang, Jinrong
Yu, Hai
Zheng, Xinkai
Ming, Wai-kit
Lak, Yau Sun
Tom, Kong Ching
Lee, Alice
Huang, Hui
Chen, Wenhui
Lyu, Jun
Deng, Liehua
author_facet Zhang, Jinrong
Yu, Hai
Zheng, Xinkai
Ming, Wai-kit
Lak, Yau Sun
Tom, Kong Ching
Lee, Alice
Huang, Hui
Chen, Wenhui
Lyu, Jun
Deng, Liehua
author_sort Zhang, Jinrong
collection PubMed
description BACKGROUND: For the purpose to examine lower limb melanoma (LLM) and its long-term survival rate, we used data from the Surveillance, Epidemiology and End Results (SEER) database. To estimate the prognosis of LLM patients and assess its efficacy, we used a powerful deep learning and neural network approach called DeepSurv. METHODS: We gathered data on those who had an LLM diagnosis between 2000 and 2019 from the SEER database. We divided the people into training and testing cohorts at a 7:3 ratio using a random selection technique. To assess the likelihood that LLM patients would survive, we compared the results of the DeepSurv model with those of the Cox proportional-hazards (CoxPH) model. Calibration curves, the time-dependent area under the receiver operating characteristic curve (AUC), and the concordance index (C-index) were all used to assess how accurate the predictions were. RESULTS: In this study, a total of 26,243 LLM patients were enrolled, with 7873 serving as the testing cohort and 18,370 as the training cohort. Significant correlations with age, gender, AJCC stage, chemotherapy status, surgery status, regional lymph node removal and the survival outcomes of LLM patients were found by the CoxPH model. The CoxPH model’s C-index was 0.766, which signifies a good degree of predicted accuracy. Additionally, we created the DeepSurv model using the training cohort data, which had a higher C-index of 0.852. In addition to calculating the 3-, 5-, and 8-year AUC values, the predictive performance of both models was evaluated. The equivalent AUC values for the CoxPH model were 0.795, 0.767, and 0.847, respectively. The DeepSurv model, in comparison, had better AUC values of 0.872, 0.858, and 0.847. In comparison to the CoxPH model, the DeepSurv model demonstrated greater prediction performance for LLM patients, as shown by the AUC values and the calibration curve. CONCLUSION: We created the DeepSurv model using LLM patient data from the SEER database, which performed better than the CoxPH model in predicting the survival time of LLM patients. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s12672-023-00823-y.
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spelling pubmed-106869152023-11-30 Deep-learning-based survival prediction of patients with lower limb melanoma Zhang, Jinrong Yu, Hai Zheng, Xinkai Ming, Wai-kit Lak, Yau Sun Tom, Kong Ching Lee, Alice Huang, Hui Chen, Wenhui Lyu, Jun Deng, Liehua Discov Oncol Research BACKGROUND: For the purpose to examine lower limb melanoma (LLM) and its long-term survival rate, we used data from the Surveillance, Epidemiology and End Results (SEER) database. To estimate the prognosis of LLM patients and assess its efficacy, we used a powerful deep learning and neural network approach called DeepSurv. METHODS: We gathered data on those who had an LLM diagnosis between 2000 and 2019 from the SEER database. We divided the people into training and testing cohorts at a 7:3 ratio using a random selection technique. To assess the likelihood that LLM patients would survive, we compared the results of the DeepSurv model with those of the Cox proportional-hazards (CoxPH) model. Calibration curves, the time-dependent area under the receiver operating characteristic curve (AUC), and the concordance index (C-index) were all used to assess how accurate the predictions were. RESULTS: In this study, a total of 26,243 LLM patients were enrolled, with 7873 serving as the testing cohort and 18,370 as the training cohort. Significant correlations with age, gender, AJCC stage, chemotherapy status, surgery status, regional lymph node removal and the survival outcomes of LLM patients were found by the CoxPH model. The CoxPH model’s C-index was 0.766, which signifies a good degree of predicted accuracy. Additionally, we created the DeepSurv model using the training cohort data, which had a higher C-index of 0.852. In addition to calculating the 3-, 5-, and 8-year AUC values, the predictive performance of both models was evaluated. The equivalent AUC values for the CoxPH model were 0.795, 0.767, and 0.847, respectively. The DeepSurv model, in comparison, had better AUC values of 0.872, 0.858, and 0.847. In comparison to the CoxPH model, the DeepSurv model demonstrated greater prediction performance for LLM patients, as shown by the AUC values and the calibration curve. CONCLUSION: We created the DeepSurv model using LLM patient data from the SEER database, which performed better than the CoxPH model in predicting the survival time of LLM patients. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s12672-023-00823-y. Springer US 2023-11-30 /pmc/articles/PMC10686915/ /pubmed/38030951 http://dx.doi.org/10.1007/s12672-023-00823-y Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Research
Zhang, Jinrong
Yu, Hai
Zheng, Xinkai
Ming, Wai-kit
Lak, Yau Sun
Tom, Kong Ching
Lee, Alice
Huang, Hui
Chen, Wenhui
Lyu, Jun
Deng, Liehua
Deep-learning-based survival prediction of patients with lower limb melanoma
title Deep-learning-based survival prediction of patients with lower limb melanoma
title_full Deep-learning-based survival prediction of patients with lower limb melanoma
title_fullStr Deep-learning-based survival prediction of patients with lower limb melanoma
title_full_unstemmed Deep-learning-based survival prediction of patients with lower limb melanoma
title_short Deep-learning-based survival prediction of patients with lower limb melanoma
title_sort deep-learning-based survival prediction of patients with lower limb melanoma
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10686915/
https://www.ncbi.nlm.nih.gov/pubmed/38030951
http://dx.doi.org/10.1007/s12672-023-00823-y
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