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A dynamic and collaborative database for morphogeometric information of trilobites
Modern morphometric-based approaches provide valuable metrics to quantify and understand macroevolutionary and macroecological patterns and processes. Here we describe TriloMorph, an openly accessible database for morpho-geometric information of trilobites, together with a landmark acquisition proto...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10687081/ https://www.ncbi.nlm.nih.gov/pubmed/38030629 http://dx.doi.org/10.1038/s41597-023-02724-9 |
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author | Serra, Fernanda Balseiro, Diego Monnet, Claude Randolfe, Enrique Bignon, Arnaud Rustán, Juan J. Bault, Valentin Muñoz, Diego F. Vaccari, N. Emilio Martinetto, Malena Crônier, Catherine Waisfeld, Beatriz G. |
author_facet | Serra, Fernanda Balseiro, Diego Monnet, Claude Randolfe, Enrique Bignon, Arnaud Rustán, Juan J. Bault, Valentin Muñoz, Diego F. Vaccari, N. Emilio Martinetto, Malena Crônier, Catherine Waisfeld, Beatriz G. |
author_sort | Serra, Fernanda |
collection | PubMed |
description | Modern morphometric-based approaches provide valuable metrics to quantify and understand macroevolutionary and macroecological patterns and processes. Here we describe TriloMorph, an openly accessible database for morpho-geometric information of trilobites, together with a landmark acquisition protocol. In addition to morphological traits, the database contains contextual data on chronostratigraphic age, geographic location, taxonomic information and lithology of landmarked specimens. In this first version, the dataset has broad taxonomic and temporal coverage and comprises more than 55% of all trilobite genera and 85% of families recorded in the Paleobiology Database through the Devonian. We provide a release of geometric morphometric data of 277 specimens linked to published references. Additionally, we established a Github repository for constant input of morphometric data by multiple contributors and present R functions that help with data retrieval and analysis. This is the first attempt of an online, dynamic and collaborative morphometric repository. By bringing this information into a single open database we enhance the possibility of performing global palaeobiological research, providing a major complement to current occurrence-based databases. |
format | Online Article Text |
id | pubmed-10687081 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-106870812023-11-30 A dynamic and collaborative database for morphogeometric information of trilobites Serra, Fernanda Balseiro, Diego Monnet, Claude Randolfe, Enrique Bignon, Arnaud Rustán, Juan J. Bault, Valentin Muñoz, Diego F. Vaccari, N. Emilio Martinetto, Malena Crônier, Catherine Waisfeld, Beatriz G. Sci Data Data Descriptor Modern morphometric-based approaches provide valuable metrics to quantify and understand macroevolutionary and macroecological patterns and processes. Here we describe TriloMorph, an openly accessible database for morpho-geometric information of trilobites, together with a landmark acquisition protocol. In addition to morphological traits, the database contains contextual data on chronostratigraphic age, geographic location, taxonomic information and lithology of landmarked specimens. In this first version, the dataset has broad taxonomic and temporal coverage and comprises more than 55% of all trilobite genera and 85% of families recorded in the Paleobiology Database through the Devonian. We provide a release of geometric morphometric data of 277 specimens linked to published references. Additionally, we established a Github repository for constant input of morphometric data by multiple contributors and present R functions that help with data retrieval and analysis. This is the first attempt of an online, dynamic and collaborative morphometric repository. By bringing this information into a single open database we enhance the possibility of performing global palaeobiological research, providing a major complement to current occurrence-based databases. Nature Publishing Group UK 2023-11-29 /pmc/articles/PMC10687081/ /pubmed/38030629 http://dx.doi.org/10.1038/s41597-023-02724-9 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Data Descriptor Serra, Fernanda Balseiro, Diego Monnet, Claude Randolfe, Enrique Bignon, Arnaud Rustán, Juan J. Bault, Valentin Muñoz, Diego F. Vaccari, N. Emilio Martinetto, Malena Crônier, Catherine Waisfeld, Beatriz G. A dynamic and collaborative database for morphogeometric information of trilobites |
title | A dynamic and collaborative database for morphogeometric information of trilobites |
title_full | A dynamic and collaborative database for morphogeometric information of trilobites |
title_fullStr | A dynamic and collaborative database for morphogeometric information of trilobites |
title_full_unstemmed | A dynamic and collaborative database for morphogeometric information of trilobites |
title_short | A dynamic and collaborative database for morphogeometric information of trilobites |
title_sort | dynamic and collaborative database for morphogeometric information of trilobites |
topic | Data Descriptor |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10687081/ https://www.ncbi.nlm.nih.gov/pubmed/38030629 http://dx.doi.org/10.1038/s41597-023-02724-9 |
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