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Paramagnetic NMR to study iron sulfur proteins: (13)C detected experiments illuminate the vicinity of the metal center

The robustness of NMR coherence transfer in proximity of a paramagnetic center depends on the relaxation properties of the nuclei involved. In the case of Iron-Sulfur Proteins, different pulse schemes or different parameter sets often provide complementary results. Tailored versions of HCACO and CAC...

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Detalles Bibliográficos
Autores principales: Querci, Leonardo, Grifagni, Deborah, Trindade, Inês B., Silva, José Malanho, Louro, Ricardo O., Cantini, Francesca, Piccioli, Mario
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Netherlands 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10687126/
https://www.ncbi.nlm.nih.gov/pubmed/37853207
http://dx.doi.org/10.1007/s10858-023-00425-4
Descripción
Sumario:The robustness of NMR coherence transfer in proximity of a paramagnetic center depends on the relaxation properties of the nuclei involved. In the case of Iron-Sulfur Proteins, different pulse schemes or different parameter sets often provide complementary results. Tailored versions of HCACO and CACO experiments significantly increase the number of observed C(α)/C’ connectivities in highly paramagnetic systems, by recovering many resonances that were lost due to paramagnetic relaxation. Optimized (13)C direct detected experiments can significantly extend the available assignments, improving the overall knowledge of these systems. The different relaxation properties of C(α) and C’ nuclei are exploited in CACO vs COCA experiments and the complementarity of the two experiments is used to obtain structural information. The two [Fe(2)S(2)](+) clusters containing NEET protein CISD3 and the one [Fe(4)S(4)](2+) cluster containing HiPIP protein PioC have been taken as model systems. We show that tailored experiments contribute to decrease the blind sphere around the cluster, to extend resonance assignment of cluster bound cysteine residues and to retrieve details on the topology of the iron-bound ligand residues. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s10858-023-00425-4.