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Information integration during bioelectric regulation of morphogenesis of the embryonic frog brain
Spatiotemporal patterns of cellular resting potential regulate several aspects of development. One key aspect of the bioelectric code is that transcriptional and morphogenetic states are determined not by local, single-cell, voltage levels but by specific distributions of voltage across cell sheets....
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10687303/ https://www.ncbi.nlm.nih.gov/pubmed/38034358 http://dx.doi.org/10.1016/j.isci.2023.108398 |
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author | Manicka, Santosh Pai, Vaibhav P. Levin, Michael |
author_facet | Manicka, Santosh Pai, Vaibhav P. Levin, Michael |
author_sort | Manicka, Santosh |
collection | PubMed |
description | Spatiotemporal patterns of cellular resting potential regulate several aspects of development. One key aspect of the bioelectric code is that transcriptional and morphogenetic states are determined not by local, single-cell, voltage levels but by specific distributions of voltage across cell sheets. We constructed and analyzed a minimal dynamical model of collective gene expression in cells based on inputs of multicellular voltage patterns. Causal integration analysis revealed a higher-order mechanism by which information about the voltage pattern was spatiotemporally integrated into gene activity, as well as a division of labor among and between the bioelectric and genetic components. We tested and confirmed predictions of this model in a system in which bioelectric control of morphogenesis regulates gene expression and organogenesis: the embryonic brain of the frog Xenopus laevis. This study demonstrates that machine learning and computational integration approaches can advance our understanding of the information-processing underlying morphogenetic decision-making, with a potential for other applications in developmental biology and regenerative medicine. |
format | Online Article Text |
id | pubmed-10687303 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-106873032023-11-30 Information integration during bioelectric regulation of morphogenesis of the embryonic frog brain Manicka, Santosh Pai, Vaibhav P. Levin, Michael iScience Article Spatiotemporal patterns of cellular resting potential regulate several aspects of development. One key aspect of the bioelectric code is that transcriptional and morphogenetic states are determined not by local, single-cell, voltage levels but by specific distributions of voltage across cell sheets. We constructed and analyzed a minimal dynamical model of collective gene expression in cells based on inputs of multicellular voltage patterns. Causal integration analysis revealed a higher-order mechanism by which information about the voltage pattern was spatiotemporally integrated into gene activity, as well as a division of labor among and between the bioelectric and genetic components. We tested and confirmed predictions of this model in a system in which bioelectric control of morphogenesis regulates gene expression and organogenesis: the embryonic brain of the frog Xenopus laevis. This study demonstrates that machine learning and computational integration approaches can advance our understanding of the information-processing underlying morphogenetic decision-making, with a potential for other applications in developmental biology and regenerative medicine. Elsevier 2023-11-04 /pmc/articles/PMC10687303/ /pubmed/38034358 http://dx.doi.org/10.1016/j.isci.2023.108398 Text en © 2023 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Article Manicka, Santosh Pai, Vaibhav P. Levin, Michael Information integration during bioelectric regulation of morphogenesis of the embryonic frog brain |
title | Information integration during bioelectric regulation of morphogenesis of the embryonic frog brain |
title_full | Information integration during bioelectric regulation of morphogenesis of the embryonic frog brain |
title_fullStr | Information integration during bioelectric regulation of morphogenesis of the embryonic frog brain |
title_full_unstemmed | Information integration during bioelectric regulation of morphogenesis of the embryonic frog brain |
title_short | Information integration during bioelectric regulation of morphogenesis of the embryonic frog brain |
title_sort | information integration during bioelectric regulation of morphogenesis of the embryonic frog brain |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10687303/ https://www.ncbi.nlm.nih.gov/pubmed/38034358 http://dx.doi.org/10.1016/j.isci.2023.108398 |
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