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DTLR-CS: Deep tensor low rank channel cross fusion neural network for reproductive cell segmentation

In recent years, with the development of deep learning technology, deep neural networks have been widely used in the field of medical image segmentation. U-shaped Network(U-Net) is a segmentation network proposed for medical images based on full-convolution and is gradually becoming the most commonl...

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Autores principales: Zhao, Xia, Wang, Jiahui, Wang, Jing, Hong, Renyun, Shen, Tao, Liu, Yi, Liang, Yuanjiao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10688749/
https://www.ncbi.nlm.nih.gov/pubmed/38032913
http://dx.doi.org/10.1371/journal.pone.0294727
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author Zhao, Xia
Wang, Jiahui
Wang, Jing
Wang, Jing
Hong, Renyun
Shen, Tao
Liu, Yi
Liang, Yuanjiao
author_facet Zhao, Xia
Wang, Jiahui
Wang, Jing
Wang, Jing
Hong, Renyun
Shen, Tao
Liu, Yi
Liang, Yuanjiao
author_sort Zhao, Xia
collection PubMed
description In recent years, with the development of deep learning technology, deep neural networks have been widely used in the field of medical image segmentation. U-shaped Network(U-Net) is a segmentation network proposed for medical images based on full-convolution and is gradually becoming the most commonly used segmentation architecture in the medical field. The encoder of U-Net is mainly used to capture the context information in the image, which plays an important role in the performance of the semantic segmentation algorithm. However, it is unstable for U-Net with simple skip connection to perform unstably in global multi-scale modelling, and it is prone to semantic gaps in feature fusion. Inspired by this, in this work, we propose a Deep Tensor Low Rank Channel Cross Fusion Neural Network (DTLR-CS) to replace the simple skip connection in U-Net. To avoid space compression and to solve the high rank problem, we designed a tensor low-ranking module to generate a large number of low-rank tensors containing context features. To reduce semantic differences, we introduced a cross-fusion connection module, which consists of a channel cross-fusion sub-module and a feature connection sub-module. Based on the proposed network, experiments have shown that our network has accurate cell segmentation performance.
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spelling pubmed-106887492023-12-01 DTLR-CS: Deep tensor low rank channel cross fusion neural network for reproductive cell segmentation Zhao, Xia Wang, Jiahui Wang, Jing Wang, Jing Hong, Renyun Shen, Tao Liu, Yi Liang, Yuanjiao PLoS One Research Article In recent years, with the development of deep learning technology, deep neural networks have been widely used in the field of medical image segmentation. U-shaped Network(U-Net) is a segmentation network proposed for medical images based on full-convolution and is gradually becoming the most commonly used segmentation architecture in the medical field. The encoder of U-Net is mainly used to capture the context information in the image, which plays an important role in the performance of the semantic segmentation algorithm. However, it is unstable for U-Net with simple skip connection to perform unstably in global multi-scale modelling, and it is prone to semantic gaps in feature fusion. Inspired by this, in this work, we propose a Deep Tensor Low Rank Channel Cross Fusion Neural Network (DTLR-CS) to replace the simple skip connection in U-Net. To avoid space compression and to solve the high rank problem, we designed a tensor low-ranking module to generate a large number of low-rank tensors containing context features. To reduce semantic differences, we introduced a cross-fusion connection module, which consists of a channel cross-fusion sub-module and a feature connection sub-module. Based on the proposed network, experiments have shown that our network has accurate cell segmentation performance. Public Library of Science 2023-11-30 /pmc/articles/PMC10688749/ /pubmed/38032913 http://dx.doi.org/10.1371/journal.pone.0294727 Text en © 2023 Zhao et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Zhao, Xia
Wang, Jiahui
Wang, Jing
Wang, Jing
Hong, Renyun
Shen, Tao
Liu, Yi
Liang, Yuanjiao
DTLR-CS: Deep tensor low rank channel cross fusion neural network for reproductive cell segmentation
title DTLR-CS: Deep tensor low rank channel cross fusion neural network for reproductive cell segmentation
title_full DTLR-CS: Deep tensor low rank channel cross fusion neural network for reproductive cell segmentation
title_fullStr DTLR-CS: Deep tensor low rank channel cross fusion neural network for reproductive cell segmentation
title_full_unstemmed DTLR-CS: Deep tensor low rank channel cross fusion neural network for reproductive cell segmentation
title_short DTLR-CS: Deep tensor low rank channel cross fusion neural network for reproductive cell segmentation
title_sort dtlr-cs: deep tensor low rank channel cross fusion neural network for reproductive cell segmentation
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10688749/
https://www.ncbi.nlm.nih.gov/pubmed/38032913
http://dx.doi.org/10.1371/journal.pone.0294727
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