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Microbial drivers of DMSO reduction and DMS-dependent methanogenesis in saltmarsh sediments
Saltmarshes are highly productive environments, exhibiting high abundances of organosulfur compounds. Dimethylsulfoniopropionate (DMSP) is produced in large quantities by algae, plants, and bacteria and is a potential precursor for dimethylsulfoxide (DMSO) and dimethylsulfide (DMS). DMSO serves as e...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10689795/ https://www.ncbi.nlm.nih.gov/pubmed/37880542 http://dx.doi.org/10.1038/s41396-023-01539-1 |
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author | Tebbe, Dennis Alexander Gruender, Charlotte Dlugosch, Leon Lõhmus, Kertu Rolfes, Sönke Könneke, Martin Chen, Yin Engelen, Bert Schäfer, Hendrik |
author_facet | Tebbe, Dennis Alexander Gruender, Charlotte Dlugosch, Leon Lõhmus, Kertu Rolfes, Sönke Könneke, Martin Chen, Yin Engelen, Bert Schäfer, Hendrik |
author_sort | Tebbe, Dennis Alexander |
collection | PubMed |
description | Saltmarshes are highly productive environments, exhibiting high abundances of organosulfur compounds. Dimethylsulfoniopropionate (DMSP) is produced in large quantities by algae, plants, and bacteria and is a potential precursor for dimethylsulfoxide (DMSO) and dimethylsulfide (DMS). DMSO serves as electron acceptor for anaerobic respiration leading to DMS formation, which is either emitted or can be degraded by methylotrophic prokaryotes. Major products of these reactions are trace gases with positive (CO(2), CH(4)) or negative (DMS) radiative forcing with contrasting effects on the global climate. Here, we investigated organic sulfur cycling in saltmarsh sediments and followed DMSO reduction in anoxic batch experiments. Compared to previous measurements from marine waters, DMSO concentrations in the saltmarsh sediments were up to ~300 fold higher. In batch experiments, DMSO was reduced to DMS and subsequently consumed with concomitant CH(4) production. Changes in prokaryotic communities and DMSO reductase gene counts indicated a dominance of organisms containing the Dms-type DMSO reductases (e.g., Desulfobulbales, Enterobacterales). In contrast, when sulfate reduction was inhibited by molybdate, Tor-type DMSO reductases (e.g., Rhodobacterales) increased. Vibrionales increased in relative abundance in both treatments, and metagenome assembled genomes (MAGs) affiliated to Vibrio had all genes encoding the subunits of DMSO reductases. Molar conversion ratios of <1.3 CH(4) per added DMSO were accompanied by a predominance of the methylotrophic methanogens Methanosarcinales. Enrichment of mtsDH genes, encoding for DMS methyl transferases in metagenomes of batch incubations indicate their role in DMS-dependent methanogenesis. MAGs affiliated to Methanolobus carried the complete set of genes encoding for the enzymes in methylotrophic methanogenesis. |
format | Online Article Text |
id | pubmed-10689795 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-106897952023-12-02 Microbial drivers of DMSO reduction and DMS-dependent methanogenesis in saltmarsh sediments Tebbe, Dennis Alexander Gruender, Charlotte Dlugosch, Leon Lõhmus, Kertu Rolfes, Sönke Könneke, Martin Chen, Yin Engelen, Bert Schäfer, Hendrik ISME J Article Saltmarshes are highly productive environments, exhibiting high abundances of organosulfur compounds. Dimethylsulfoniopropionate (DMSP) is produced in large quantities by algae, plants, and bacteria and is a potential precursor for dimethylsulfoxide (DMSO) and dimethylsulfide (DMS). DMSO serves as electron acceptor for anaerobic respiration leading to DMS formation, which is either emitted or can be degraded by methylotrophic prokaryotes. Major products of these reactions are trace gases with positive (CO(2), CH(4)) or negative (DMS) radiative forcing with contrasting effects on the global climate. Here, we investigated organic sulfur cycling in saltmarsh sediments and followed DMSO reduction in anoxic batch experiments. Compared to previous measurements from marine waters, DMSO concentrations in the saltmarsh sediments were up to ~300 fold higher. In batch experiments, DMSO was reduced to DMS and subsequently consumed with concomitant CH(4) production. Changes in prokaryotic communities and DMSO reductase gene counts indicated a dominance of organisms containing the Dms-type DMSO reductases (e.g., Desulfobulbales, Enterobacterales). In contrast, when sulfate reduction was inhibited by molybdate, Tor-type DMSO reductases (e.g., Rhodobacterales) increased. Vibrionales increased in relative abundance in both treatments, and metagenome assembled genomes (MAGs) affiliated to Vibrio had all genes encoding the subunits of DMSO reductases. Molar conversion ratios of <1.3 CH(4) per added DMSO were accompanied by a predominance of the methylotrophic methanogens Methanosarcinales. Enrichment of mtsDH genes, encoding for DMS methyl transferases in metagenomes of batch incubations indicate their role in DMS-dependent methanogenesis. MAGs affiliated to Methanolobus carried the complete set of genes encoding for the enzymes in methylotrophic methanogenesis. Nature Publishing Group UK 2023-10-25 2023-12 /pmc/articles/PMC10689795/ /pubmed/37880542 http://dx.doi.org/10.1038/s41396-023-01539-1 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Tebbe, Dennis Alexander Gruender, Charlotte Dlugosch, Leon Lõhmus, Kertu Rolfes, Sönke Könneke, Martin Chen, Yin Engelen, Bert Schäfer, Hendrik Microbial drivers of DMSO reduction and DMS-dependent methanogenesis in saltmarsh sediments |
title | Microbial drivers of DMSO reduction and DMS-dependent methanogenesis in saltmarsh sediments |
title_full | Microbial drivers of DMSO reduction and DMS-dependent methanogenesis in saltmarsh sediments |
title_fullStr | Microbial drivers of DMSO reduction and DMS-dependent methanogenesis in saltmarsh sediments |
title_full_unstemmed | Microbial drivers of DMSO reduction and DMS-dependent methanogenesis in saltmarsh sediments |
title_short | Microbial drivers of DMSO reduction and DMS-dependent methanogenesis in saltmarsh sediments |
title_sort | microbial drivers of dmso reduction and dms-dependent methanogenesis in saltmarsh sediments |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10689795/ https://www.ncbi.nlm.nih.gov/pubmed/37880542 http://dx.doi.org/10.1038/s41396-023-01539-1 |
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