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Automated design of dynamic programming schemes for RNA folding with pseudoknots

Although RNA secondary structure prediction is a textbook application of dynamic programming (DP) and routine task in RNA structure analysis, it remains challenging whenever pseudoknots come into play. Since the prediction of pseudoknotted structures by minimizing (realistically modelled) energy is...

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Detalles Bibliográficos
Autores principales: Marchand, Bertrand, Will, Sebastian, Berkemer, Sarah J., Ponty, Yann, Bulteau, Laurent
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10691146/
https://www.ncbi.nlm.nih.gov/pubmed/38041153
http://dx.doi.org/10.1186/s13015-023-00229-z