Cargando…
Automated design of dynamic programming schemes for RNA folding with pseudoknots
Although RNA secondary structure prediction is a textbook application of dynamic programming (DP) and routine task in RNA structure analysis, it remains challenging whenever pseudoknots come into play. Since the prediction of pseudoknotted structures by minimizing (realistically modelled) energy is...
Autores principales: | Marchand, Bertrand, Will, Sebastian, Berkemer, Sarah J., Ponty, Yann, Bulteau, Laurent |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10691146/ https://www.ncbi.nlm.nih.gov/pubmed/38041153 http://dx.doi.org/10.1186/s13015-023-00229-z |
Ejemplares similares
-
Tree diet: reducing the treewidth to unlock FPT algorithms in RNA bioinformatics
por: Marchand, Bertrand, et al.
Publicado: (2022) -
RNA pseudoknots: folding and finding
por: Liu, Biao, et al.
Publicado: (2010) -
Pseudoknots in RNA folding landscapes
por: Kucharík, Marcel, et al.
Publicado: (2016) -
Design of RNAs: comparing programs for inverse RNA folding
por: Churkin, Alexander, et al.
Publicado: (2017) -
Predicting RNA pseudoknot folding thermodynamics
por: Cao, Song, et al.
Publicado: (2006)