Cargando…

Application of a pyramid pooling Unet model with integrated attention mechanism and Inception module in pancreatic tumor segmentation

BACKGROUND: The segmentation and recognition of pancreatic tumors are crucial tasks in the diagnosis and treatment of pancreatic diseases. However, due to the relatively small proportion of the pancreas in the abdomen and significant shape and size variations, pancreatic tumor segmentation poses con...

Descripción completa

Detalles Bibliográficos
Autores principales: Zhang, Zhiwei, Tian, Hui, Xu, Zhenshun, Bian, Yun, Wu, Jie
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10691628/
https://www.ncbi.nlm.nih.gov/pubmed/37937804
http://dx.doi.org/10.1002/acm2.14204
_version_ 1785152773989335040
author Zhang, Zhiwei
Tian, Hui
Xu, Zhenshun
Bian, Yun
Wu, Jie
author_facet Zhang, Zhiwei
Tian, Hui
Xu, Zhenshun
Bian, Yun
Wu, Jie
author_sort Zhang, Zhiwei
collection PubMed
description BACKGROUND: The segmentation and recognition of pancreatic tumors are crucial tasks in the diagnosis and treatment of pancreatic diseases. However, due to the relatively small proportion of the pancreas in the abdomen and significant shape and size variations, pancreatic tumor segmentation poses considerable challenges. PURPOSE: To construct a network model that combines a pyramid pooling module with Inception architecture and SE attention mechanism (PIS‐Unet), and observe its effectiveness in pancreatic tumor images segmentation, thereby providing supportive recommendations for clinical practitioners. MATERIALS AND METHODS: A total of 303 patients with histologically confirmed pancreatic cystic neoplasm (PCN), including serous cystic neoplasm (SCN) and mucinous cystic neoplasm (MCN), from Shanghai Changhai Hospital between March 2011 and November 2021 were included. A total of 1792 T2‐weighted imaging (T2WI) slices were used to build a CNN model. The model employed a pyramid pooling Inception module with a fused attention mechanism. The attention mechanism enhanced the network's focus on local features, while the Inception module and pyramid pooling allowed the network to extract features at different scales and improve the utilization efficiency of global information, thereby effectively enhancing network performance. RESULTS: Using three‐fold cross‐validation, the model constructed by us achieved a dice score of 85.49 ± 2.02 for SCN images segmentation, and a dice score of 87.90 ± 4.19 for MCN images segmentation. CONCLUSION: This study demonstrates that using deep learning networks for the segmentation of PCNs yields favorable results. Applying this network as an aid to physicians in PCN diagnosis shows potential for clinical applications.
format Online
Article
Text
id pubmed-10691628
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher John Wiley and Sons Inc.
record_format MEDLINE/PubMed
spelling pubmed-106916282023-12-02 Application of a pyramid pooling Unet model with integrated attention mechanism and Inception module in pancreatic tumor segmentation Zhang, Zhiwei Tian, Hui Xu, Zhenshun Bian, Yun Wu, Jie J Appl Clin Med Phys Medical Imaging BACKGROUND: The segmentation and recognition of pancreatic tumors are crucial tasks in the diagnosis and treatment of pancreatic diseases. However, due to the relatively small proportion of the pancreas in the abdomen and significant shape and size variations, pancreatic tumor segmentation poses considerable challenges. PURPOSE: To construct a network model that combines a pyramid pooling module with Inception architecture and SE attention mechanism (PIS‐Unet), and observe its effectiveness in pancreatic tumor images segmentation, thereby providing supportive recommendations for clinical practitioners. MATERIALS AND METHODS: A total of 303 patients with histologically confirmed pancreatic cystic neoplasm (PCN), including serous cystic neoplasm (SCN) and mucinous cystic neoplasm (MCN), from Shanghai Changhai Hospital between March 2011 and November 2021 were included. A total of 1792 T2‐weighted imaging (T2WI) slices were used to build a CNN model. The model employed a pyramid pooling Inception module with a fused attention mechanism. The attention mechanism enhanced the network's focus on local features, while the Inception module and pyramid pooling allowed the network to extract features at different scales and improve the utilization efficiency of global information, thereby effectively enhancing network performance. RESULTS: Using three‐fold cross‐validation, the model constructed by us achieved a dice score of 85.49 ± 2.02 for SCN images segmentation, and a dice score of 87.90 ± 4.19 for MCN images segmentation. CONCLUSION: This study demonstrates that using deep learning networks for the segmentation of PCNs yields favorable results. Applying this network as an aid to physicians in PCN diagnosis shows potential for clinical applications. John Wiley and Sons Inc. 2023-11-08 /pmc/articles/PMC10691628/ /pubmed/37937804 http://dx.doi.org/10.1002/acm2.14204 Text en © 2023 The Authors. Journal of Applied Clinical Medical Physics published by Wiley Periodicals LLC on behalf of American Association of Physicists in Medicine. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Medical Imaging
Zhang, Zhiwei
Tian, Hui
Xu, Zhenshun
Bian, Yun
Wu, Jie
Application of a pyramid pooling Unet model with integrated attention mechanism and Inception module in pancreatic tumor segmentation
title Application of a pyramid pooling Unet model with integrated attention mechanism and Inception module in pancreatic tumor segmentation
title_full Application of a pyramid pooling Unet model with integrated attention mechanism and Inception module in pancreatic tumor segmentation
title_fullStr Application of a pyramid pooling Unet model with integrated attention mechanism and Inception module in pancreatic tumor segmentation
title_full_unstemmed Application of a pyramid pooling Unet model with integrated attention mechanism and Inception module in pancreatic tumor segmentation
title_short Application of a pyramid pooling Unet model with integrated attention mechanism and Inception module in pancreatic tumor segmentation
title_sort application of a pyramid pooling unet model with integrated attention mechanism and inception module in pancreatic tumor segmentation
topic Medical Imaging
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10691628/
https://www.ncbi.nlm.nih.gov/pubmed/37937804
http://dx.doi.org/10.1002/acm2.14204
work_keys_str_mv AT zhangzhiwei applicationofapyramidpoolingunetmodelwithintegratedattentionmechanismandinceptionmoduleinpancreatictumorsegmentation
AT tianhui applicationofapyramidpoolingunetmodelwithintegratedattentionmechanismandinceptionmoduleinpancreatictumorsegmentation
AT xuzhenshun applicationofapyramidpoolingunetmodelwithintegratedattentionmechanismandinceptionmoduleinpancreatictumorsegmentation
AT bianyun applicationofapyramidpoolingunetmodelwithintegratedattentionmechanismandinceptionmoduleinpancreatictumorsegmentation
AT wujie applicationofapyramidpoolingunetmodelwithintegratedattentionmechanismandinceptionmoduleinpancreatictumorsegmentation