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Application of a pyramid pooling Unet model with integrated attention mechanism and Inception module in pancreatic tumor segmentation
BACKGROUND: The segmentation and recognition of pancreatic tumors are crucial tasks in the diagnosis and treatment of pancreatic diseases. However, due to the relatively small proportion of the pancreas in the abdomen and significant shape and size variations, pancreatic tumor segmentation poses con...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10691628/ https://www.ncbi.nlm.nih.gov/pubmed/37937804 http://dx.doi.org/10.1002/acm2.14204 |
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author | Zhang, Zhiwei Tian, Hui Xu, Zhenshun Bian, Yun Wu, Jie |
author_facet | Zhang, Zhiwei Tian, Hui Xu, Zhenshun Bian, Yun Wu, Jie |
author_sort | Zhang, Zhiwei |
collection | PubMed |
description | BACKGROUND: The segmentation and recognition of pancreatic tumors are crucial tasks in the diagnosis and treatment of pancreatic diseases. However, due to the relatively small proportion of the pancreas in the abdomen and significant shape and size variations, pancreatic tumor segmentation poses considerable challenges. PURPOSE: To construct a network model that combines a pyramid pooling module with Inception architecture and SE attention mechanism (PIS‐Unet), and observe its effectiveness in pancreatic tumor images segmentation, thereby providing supportive recommendations for clinical practitioners. MATERIALS AND METHODS: A total of 303 patients with histologically confirmed pancreatic cystic neoplasm (PCN), including serous cystic neoplasm (SCN) and mucinous cystic neoplasm (MCN), from Shanghai Changhai Hospital between March 2011 and November 2021 were included. A total of 1792 T2‐weighted imaging (T2WI) slices were used to build a CNN model. The model employed a pyramid pooling Inception module with a fused attention mechanism. The attention mechanism enhanced the network's focus on local features, while the Inception module and pyramid pooling allowed the network to extract features at different scales and improve the utilization efficiency of global information, thereby effectively enhancing network performance. RESULTS: Using three‐fold cross‐validation, the model constructed by us achieved a dice score of 85.49 ± 2.02 for SCN images segmentation, and a dice score of 87.90 ± 4.19 for MCN images segmentation. CONCLUSION: This study demonstrates that using deep learning networks for the segmentation of PCNs yields favorable results. Applying this network as an aid to physicians in PCN diagnosis shows potential for clinical applications. |
format | Online Article Text |
id | pubmed-10691628 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-106916282023-12-02 Application of a pyramid pooling Unet model with integrated attention mechanism and Inception module in pancreatic tumor segmentation Zhang, Zhiwei Tian, Hui Xu, Zhenshun Bian, Yun Wu, Jie J Appl Clin Med Phys Medical Imaging BACKGROUND: The segmentation and recognition of pancreatic tumors are crucial tasks in the diagnosis and treatment of pancreatic diseases. However, due to the relatively small proportion of the pancreas in the abdomen and significant shape and size variations, pancreatic tumor segmentation poses considerable challenges. PURPOSE: To construct a network model that combines a pyramid pooling module with Inception architecture and SE attention mechanism (PIS‐Unet), and observe its effectiveness in pancreatic tumor images segmentation, thereby providing supportive recommendations for clinical practitioners. MATERIALS AND METHODS: A total of 303 patients with histologically confirmed pancreatic cystic neoplasm (PCN), including serous cystic neoplasm (SCN) and mucinous cystic neoplasm (MCN), from Shanghai Changhai Hospital between March 2011 and November 2021 were included. A total of 1792 T2‐weighted imaging (T2WI) slices were used to build a CNN model. The model employed a pyramid pooling Inception module with a fused attention mechanism. The attention mechanism enhanced the network's focus on local features, while the Inception module and pyramid pooling allowed the network to extract features at different scales and improve the utilization efficiency of global information, thereby effectively enhancing network performance. RESULTS: Using three‐fold cross‐validation, the model constructed by us achieved a dice score of 85.49 ± 2.02 for SCN images segmentation, and a dice score of 87.90 ± 4.19 for MCN images segmentation. CONCLUSION: This study demonstrates that using deep learning networks for the segmentation of PCNs yields favorable results. Applying this network as an aid to physicians in PCN diagnosis shows potential for clinical applications. John Wiley and Sons Inc. 2023-11-08 /pmc/articles/PMC10691628/ /pubmed/37937804 http://dx.doi.org/10.1002/acm2.14204 Text en © 2023 The Authors. Journal of Applied Clinical Medical Physics published by Wiley Periodicals LLC on behalf of American Association of Physicists in Medicine. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Medical Imaging Zhang, Zhiwei Tian, Hui Xu, Zhenshun Bian, Yun Wu, Jie Application of a pyramid pooling Unet model with integrated attention mechanism and Inception module in pancreatic tumor segmentation |
title | Application of a pyramid pooling Unet model with integrated attention mechanism and Inception module in pancreatic tumor segmentation |
title_full | Application of a pyramid pooling Unet model with integrated attention mechanism and Inception module in pancreatic tumor segmentation |
title_fullStr | Application of a pyramid pooling Unet model with integrated attention mechanism and Inception module in pancreatic tumor segmentation |
title_full_unstemmed | Application of a pyramid pooling Unet model with integrated attention mechanism and Inception module in pancreatic tumor segmentation |
title_short | Application of a pyramid pooling Unet model with integrated attention mechanism and Inception module in pancreatic tumor segmentation |
title_sort | application of a pyramid pooling unet model with integrated attention mechanism and inception module in pancreatic tumor segmentation |
topic | Medical Imaging |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10691628/ https://www.ncbi.nlm.nih.gov/pubmed/37937804 http://dx.doi.org/10.1002/acm2.14204 |
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