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Identifying the optimal deep learning architecture and parameters for automatic beam aperture definition in 3D radiotherapy
PURPOSE: Two‐dimensional radiotherapy is often used to treat cervical cancer in low‐ and middle‐income countries, but treatment planning can be challenging and time‐consuming. Neural networks offer the potential to greatly decrease planning time through automation, but the impact of the wide range o...
Autores principales: | , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10691634/ https://www.ncbi.nlm.nih.gov/pubmed/37670488 http://dx.doi.org/10.1002/acm2.14131 |
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author | Gay, Skylar S. Kisling, Kelly D. Anderson, Brian M. Zhang, Lifei Rhee, Dong Joo Nguyen, Callistus Netherton, Tucker Yang, Jinzhong Brock, Kristy Jhingran, Anuja Simonds, Hannah Klopp, Ann Beadle, Beth M. Court, Laurence E. Cardenas, Carlos E. |
author_facet | Gay, Skylar S. Kisling, Kelly D. Anderson, Brian M. Zhang, Lifei Rhee, Dong Joo Nguyen, Callistus Netherton, Tucker Yang, Jinzhong Brock, Kristy Jhingran, Anuja Simonds, Hannah Klopp, Ann Beadle, Beth M. Court, Laurence E. Cardenas, Carlos E. |
author_sort | Gay, Skylar S. |
collection | PubMed |
description | PURPOSE: Two‐dimensional radiotherapy is often used to treat cervical cancer in low‐ and middle‐income countries, but treatment planning can be challenging and time‐consuming. Neural networks offer the potential to greatly decrease planning time through automation, but the impact of the wide range of hyperparameters to be set during training on model accuracy has not been exhaustively investigated. In the current study, we evaluated the effect of several convolutional neural network architectures and hyperparameters on 2D radiotherapy treatment field delineation. METHODS: Six commonly used deep learning architectures were trained to delineate four‐field box apertures on digitally reconstructed radiographs for cervical cancer radiotherapy. A comprehensive search of optimal hyperparameters for all models was conducted by varying the initial learning rate, image normalization methods, and (when appropriate) convolutional kernel size, the number of learnable parameters via network depth and the number of feature maps per convolution, and nonlinear activation functions. This yielded over 1700 unique models, which were all trained until performance converged and then tested on a separate dataset. RESULTS: Of all hyperparameters, the choice of initial learning rate was most consistently significant for improved performance on the test set, with all top‐performing models using learning rates of 0.0001. The optimal image normalization was not consistent across architectures. High overlap (mean Dice similarity coefficient = 0.98) and surface distance agreement (mean surface distance < 2 mm) were achieved between the treatment field apertures for all architectures using the identified best hyperparameters. Overlap Dice similarity coefficient (DSC) and distance metrics (mean surface distance and Hausdorff distance) indicated that DeepLabv3+ and D‐LinkNet architectures were least sensitive to initial hyperparameter selection. CONCLUSION: DeepLabv3+ and D‐LinkNet are most robust to initial hyperparameter selection. Learning rate, nonlinear activation function, and kernel size are also important hyperparameters for improving performance. |
format | Online Article Text |
id | pubmed-10691634 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-106916342023-12-02 Identifying the optimal deep learning architecture and parameters for automatic beam aperture definition in 3D radiotherapy Gay, Skylar S. Kisling, Kelly D. Anderson, Brian M. Zhang, Lifei Rhee, Dong Joo Nguyen, Callistus Netherton, Tucker Yang, Jinzhong Brock, Kristy Jhingran, Anuja Simonds, Hannah Klopp, Ann Beadle, Beth M. Court, Laurence E. Cardenas, Carlos E. J Appl Clin Med Phys Radiation Oncology Physics PURPOSE: Two‐dimensional radiotherapy is often used to treat cervical cancer in low‐ and middle‐income countries, but treatment planning can be challenging and time‐consuming. Neural networks offer the potential to greatly decrease planning time through automation, but the impact of the wide range of hyperparameters to be set during training on model accuracy has not been exhaustively investigated. In the current study, we evaluated the effect of several convolutional neural network architectures and hyperparameters on 2D radiotherapy treatment field delineation. METHODS: Six commonly used deep learning architectures were trained to delineate four‐field box apertures on digitally reconstructed radiographs for cervical cancer radiotherapy. A comprehensive search of optimal hyperparameters for all models was conducted by varying the initial learning rate, image normalization methods, and (when appropriate) convolutional kernel size, the number of learnable parameters via network depth and the number of feature maps per convolution, and nonlinear activation functions. This yielded over 1700 unique models, which were all trained until performance converged and then tested on a separate dataset. RESULTS: Of all hyperparameters, the choice of initial learning rate was most consistently significant for improved performance on the test set, with all top‐performing models using learning rates of 0.0001. The optimal image normalization was not consistent across architectures. High overlap (mean Dice similarity coefficient = 0.98) and surface distance agreement (mean surface distance < 2 mm) were achieved between the treatment field apertures for all architectures using the identified best hyperparameters. Overlap Dice similarity coefficient (DSC) and distance metrics (mean surface distance and Hausdorff distance) indicated that DeepLabv3+ and D‐LinkNet architectures were least sensitive to initial hyperparameter selection. CONCLUSION: DeepLabv3+ and D‐LinkNet are most robust to initial hyperparameter selection. Learning rate, nonlinear activation function, and kernel size are also important hyperparameters for improving performance. John Wiley and Sons Inc. 2023-09-05 /pmc/articles/PMC10691634/ /pubmed/37670488 http://dx.doi.org/10.1002/acm2.14131 Text en © 2023 The Authors. Journal of Applied Clinical Medical Physics published by Wiley Periodicals, LLC on behalf of The American Association of Physicists in Medicine. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Radiation Oncology Physics Gay, Skylar S. Kisling, Kelly D. Anderson, Brian M. Zhang, Lifei Rhee, Dong Joo Nguyen, Callistus Netherton, Tucker Yang, Jinzhong Brock, Kristy Jhingran, Anuja Simonds, Hannah Klopp, Ann Beadle, Beth M. Court, Laurence E. Cardenas, Carlos E. Identifying the optimal deep learning architecture and parameters for automatic beam aperture definition in 3D radiotherapy |
title | Identifying the optimal deep learning architecture and parameters for automatic beam aperture definition in 3D radiotherapy |
title_full | Identifying the optimal deep learning architecture and parameters for automatic beam aperture definition in 3D radiotherapy |
title_fullStr | Identifying the optimal deep learning architecture and parameters for automatic beam aperture definition in 3D radiotherapy |
title_full_unstemmed | Identifying the optimal deep learning architecture and parameters for automatic beam aperture definition in 3D radiotherapy |
title_short | Identifying the optimal deep learning architecture and parameters for automatic beam aperture definition in 3D radiotherapy |
title_sort | identifying the optimal deep learning architecture and parameters for automatic beam aperture definition in 3d radiotherapy |
topic | Radiation Oncology Physics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10691634/ https://www.ncbi.nlm.nih.gov/pubmed/37670488 http://dx.doi.org/10.1002/acm2.14131 |
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