Cargando…

Quantifying the effects of vagus nerve stimulation on gastric myoelectric activity in ferrets using an interpretable machine learning approach

Vagus nerve stimulation (VNS) is a potential treatment option for gastrointestinal (GI) diseases. The present study aimed to understand the physiological effects of VNS on gastrointestinal (GI) function, which is crucial for developing more effective adaptive closed-loop VNS therapies for GI disease...

Descripción completa

Detalles Bibliográficos
Autores principales: Zeydabadinezhad, Mahmoud, Horn, Charles C., Mahmoudi, Babak
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10691721/
https://www.ncbi.nlm.nih.gov/pubmed/38039299
http://dx.doi.org/10.1371/journal.pone.0295297
_version_ 1785152795987410944
author Zeydabadinezhad, Mahmoud
Horn, Charles C.
Mahmoudi, Babak
author_facet Zeydabadinezhad, Mahmoud
Horn, Charles C.
Mahmoudi, Babak
author_sort Zeydabadinezhad, Mahmoud
collection PubMed
description Vagus nerve stimulation (VNS) is a potential treatment option for gastrointestinal (GI) diseases. The present study aimed to understand the physiological effects of VNS on gastrointestinal (GI) function, which is crucial for developing more effective adaptive closed-loop VNS therapies for GI diseases. Electrogastrography (EGG), which measures gastric electrical activities (GEAs) as a proxy to quantify GI functions, was employed in our investigation. We introduced a recording schema that allowed us to simultaneously induce electrical VNS and record EGG. While this setup created a unique model for studying the effects of VNS on the GI function and provided an excellent testbed for designing advanced neuromodulation therapies, the resulting data was noisy, heterogeneous, and required specialized analysis tools. The current study aimed at formulating a systematic and interpretable approach to quantify the physiological effects of electrical VNS on GEAs in ferrets by using signal processing and machine learning techniques. Our analysis pipeline included pre-processing steps, feature extraction from both time and frequency domains, a voting algorithm for selecting features, and model training and validation. Our results indicated that the electrophysiological changes induced by VNS were optimally characterized by a distinct set of features for each classification scenario. Additionally, our findings demonstrated that the process of feature selection enhanced classification performance and facilitated representation learning.
format Online
Article
Text
id pubmed-10691721
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-106917212023-12-02 Quantifying the effects of vagus nerve stimulation on gastric myoelectric activity in ferrets using an interpretable machine learning approach Zeydabadinezhad, Mahmoud Horn, Charles C. Mahmoudi, Babak PLoS One Research Article Vagus nerve stimulation (VNS) is a potential treatment option for gastrointestinal (GI) diseases. The present study aimed to understand the physiological effects of VNS on gastrointestinal (GI) function, which is crucial for developing more effective adaptive closed-loop VNS therapies for GI diseases. Electrogastrography (EGG), which measures gastric electrical activities (GEAs) as a proxy to quantify GI functions, was employed in our investigation. We introduced a recording schema that allowed us to simultaneously induce electrical VNS and record EGG. While this setup created a unique model for studying the effects of VNS on the GI function and provided an excellent testbed for designing advanced neuromodulation therapies, the resulting data was noisy, heterogeneous, and required specialized analysis tools. The current study aimed at formulating a systematic and interpretable approach to quantify the physiological effects of electrical VNS on GEAs in ferrets by using signal processing and machine learning techniques. Our analysis pipeline included pre-processing steps, feature extraction from both time and frequency domains, a voting algorithm for selecting features, and model training and validation. Our results indicated that the electrophysiological changes induced by VNS were optimally characterized by a distinct set of features for each classification scenario. Additionally, our findings demonstrated that the process of feature selection enhanced classification performance and facilitated representation learning. Public Library of Science 2023-12-01 /pmc/articles/PMC10691721/ /pubmed/38039299 http://dx.doi.org/10.1371/journal.pone.0295297 Text en © 2023 Zeydabadinezhad et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Zeydabadinezhad, Mahmoud
Horn, Charles C.
Mahmoudi, Babak
Quantifying the effects of vagus nerve stimulation on gastric myoelectric activity in ferrets using an interpretable machine learning approach
title Quantifying the effects of vagus nerve stimulation on gastric myoelectric activity in ferrets using an interpretable machine learning approach
title_full Quantifying the effects of vagus nerve stimulation on gastric myoelectric activity in ferrets using an interpretable machine learning approach
title_fullStr Quantifying the effects of vagus nerve stimulation on gastric myoelectric activity in ferrets using an interpretable machine learning approach
title_full_unstemmed Quantifying the effects of vagus nerve stimulation on gastric myoelectric activity in ferrets using an interpretable machine learning approach
title_short Quantifying the effects of vagus nerve stimulation on gastric myoelectric activity in ferrets using an interpretable machine learning approach
title_sort quantifying the effects of vagus nerve stimulation on gastric myoelectric activity in ferrets using an interpretable machine learning approach
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10691721/
https://www.ncbi.nlm.nih.gov/pubmed/38039299
http://dx.doi.org/10.1371/journal.pone.0295297
work_keys_str_mv AT zeydabadinezhadmahmoud quantifyingtheeffectsofvagusnervestimulationongastricmyoelectricactivityinferretsusinganinterpretablemachinelearningapproach
AT horncharlesc quantifyingtheeffectsofvagusnervestimulationongastricmyoelectricactivityinferretsusinganinterpretablemachinelearningapproach
AT mahmoudibabak quantifyingtheeffectsofvagusnervestimulationongastricmyoelectricactivityinferretsusinganinterpretablemachinelearningapproach