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Mitophagy genes in ovarian cancer: a comprehensive analysis for improved immunotherapy

BACKGROUND: Mitophagy is a process of selectively degrading damaged mitochondria, which has been found to be related to immunity, tumorigenesis, tumor progression, and metastasis. However, the role of mitophagy-related genes (MRGs) in the tumor microenvironment (TME) of ovarian cancer (OV) remains l...

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Autores principales: He, Wenting, Chen, Jieping, Zhou, Yun, Deng, Ting, Feng, Yanling, Luo, Xiaolin, Zhang, Chuyao, Huang, He, Liu, Jihong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer US 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10692064/
https://www.ncbi.nlm.nih.gov/pubmed/38038814
http://dx.doi.org/10.1007/s12672-023-00750-y
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author He, Wenting
Chen, Jieping
Zhou, Yun
Deng, Ting
Feng, Yanling
Luo, Xiaolin
Zhang, Chuyao
Huang, He
Liu, Jihong
author_facet He, Wenting
Chen, Jieping
Zhou, Yun
Deng, Ting
Feng, Yanling
Luo, Xiaolin
Zhang, Chuyao
Huang, He
Liu, Jihong
author_sort He, Wenting
collection PubMed
description BACKGROUND: Mitophagy is a process of selectively degrading damaged mitochondria, which has been found to be related to immunity, tumorigenesis, tumor progression, and metastasis. However, the role of mitophagy-related genes (MRGs) in the tumor microenvironment (TME) of ovarian cancer (OV) remains largely unexplored. METHODS: We analyzed the expression, prognosis, and genetic alterations of 29 MRGs in 480 OV samples. Unsupervised clustering was used to classify OV into two subtypes (clusters A and B) based on MRG changes. We compared the clinical features, differential expressed genes (DEGs), pathways, and immune cell infiltration between the two clusters. We constructed a mitophagy scoring system (MRG_score) based on the DEGs and validated its ability to predict overall survival of OV patients. RESULTS: We found that patients with high MRG_scores had better survival status and increased infiltration by immune cells. Further analysis showed that these patients may be more sensitive to immune checkpoint inhibitor (ICI) treatment. Additionally, the MRG_score significantly correlated with the sensitivity of chemotherapeutic drugs and targeted inhibitors. CONCLUSION: Our comprehensive analysis of MRGs in the TME, clinical features, and patient prognosis revealed that the MRG_score is a potentially effective prognostic biomarker and predictor of treatment. This study provides new insights into the role of MRGs in OV and identifies patients who may benefit from ICI treatment, chemotherapy, or targeted treatment. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s12672-023-00750-y.
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spelling pubmed-106920642023-12-03 Mitophagy genes in ovarian cancer: a comprehensive analysis for improved immunotherapy He, Wenting Chen, Jieping Zhou, Yun Deng, Ting Feng, Yanling Luo, Xiaolin Zhang, Chuyao Huang, He Liu, Jihong Discov Oncol Research BACKGROUND: Mitophagy is a process of selectively degrading damaged mitochondria, which has been found to be related to immunity, tumorigenesis, tumor progression, and metastasis. However, the role of mitophagy-related genes (MRGs) in the tumor microenvironment (TME) of ovarian cancer (OV) remains largely unexplored. METHODS: We analyzed the expression, prognosis, and genetic alterations of 29 MRGs in 480 OV samples. Unsupervised clustering was used to classify OV into two subtypes (clusters A and B) based on MRG changes. We compared the clinical features, differential expressed genes (DEGs), pathways, and immune cell infiltration between the two clusters. We constructed a mitophagy scoring system (MRG_score) based on the DEGs and validated its ability to predict overall survival of OV patients. RESULTS: We found that patients with high MRG_scores had better survival status and increased infiltration by immune cells. Further analysis showed that these patients may be more sensitive to immune checkpoint inhibitor (ICI) treatment. Additionally, the MRG_score significantly correlated with the sensitivity of chemotherapeutic drugs and targeted inhibitors. CONCLUSION: Our comprehensive analysis of MRGs in the TME, clinical features, and patient prognosis revealed that the MRG_score is a potentially effective prognostic biomarker and predictor of treatment. This study provides new insights into the role of MRGs in OV and identifies patients who may benefit from ICI treatment, chemotherapy, or targeted treatment. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s12672-023-00750-y. Springer US 2023-12-01 /pmc/articles/PMC10692064/ /pubmed/38038814 http://dx.doi.org/10.1007/s12672-023-00750-y Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Research
He, Wenting
Chen, Jieping
Zhou, Yun
Deng, Ting
Feng, Yanling
Luo, Xiaolin
Zhang, Chuyao
Huang, He
Liu, Jihong
Mitophagy genes in ovarian cancer: a comprehensive analysis for improved immunotherapy
title Mitophagy genes in ovarian cancer: a comprehensive analysis for improved immunotherapy
title_full Mitophagy genes in ovarian cancer: a comprehensive analysis for improved immunotherapy
title_fullStr Mitophagy genes in ovarian cancer: a comprehensive analysis for improved immunotherapy
title_full_unstemmed Mitophagy genes in ovarian cancer: a comprehensive analysis for improved immunotherapy
title_short Mitophagy genes in ovarian cancer: a comprehensive analysis for improved immunotherapy
title_sort mitophagy genes in ovarian cancer: a comprehensive analysis for improved immunotherapy
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10692064/
https://www.ncbi.nlm.nih.gov/pubmed/38038814
http://dx.doi.org/10.1007/s12672-023-00750-y
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