Cargando…
PDBe CCDUtils: an RDKit-based toolkit for handling and analysing small molecules in the Protein Data Bank
While the Protein Data Bank (PDB) contains a wealth of structural information on ligands bound to macromolecules, their analysis can be challenging due to the large amount and diversity of data. Here, we present PDBe CCDUtils, a versatile toolkit for processing and analysing small molecules from the...
Autores principales: | Kunnakkattu, Ibrahim Roshan, Choudhary, Preeti, Pravda, Lukas, Nadzirin, Nurul, Smart, Oliver S., Yuan, Qi, Anyango, Stephen, Nair, Sreenath, Varadi, Mihaly, Velankar, Sameer |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer International Publishing
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10693035/ https://www.ncbi.nlm.nih.gov/pubmed/38042830 http://dx.doi.org/10.1186/s13321-023-00786-w |
Ejemplares similares
-
PDBe aggregated API: programmatic access to an integrative knowledge graph of molecular structure data
por: Nair, Sreenath, et al.
Publicado: (2021) -
PDBeCIF: an open-source mmCIF/CIF parsing and processing package
por: van Ginkel, Glen, et al.
Publicado: (2021) -
PDBe: towards reusable data delivery infrastructure at protein data bank in Europe
por: Mir, Saqib, et al.
Publicado: (2018) -
PDBe and PDBe‐KB: Providing high‐quality, up‐to‐date and integrated resources of macromolecular structures to support basic and applied research and education
por: Varadi, Mihaly, et al.
Publicado: (2022) -
PDBe: improved findability of macromolecular structure data in the PDB
por: Armstrong, David R, et al.
Publicado: (2020)