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Gene mutation analysis of oral submucous fibrosis cancerization in Hainan Island

OBJECTIVE: The sequencing panel composed of 61 target genes was used to explore the related mutation genes of oral squamous cell carcinoma (OSCC) and oral submucous fibrosis (OSF) cancerization, so as to provide a theoretical basis for the early diagnosis of oral submucous fibrosis cancerization, fi...

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Autores principales: Li, Bingxia, Chen, Xinyu, Xian, Haiyu, Wen, Qitao, Wang, Tao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: PeerJ Inc. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10693820/
https://www.ncbi.nlm.nih.gov/pubmed/38050610
http://dx.doi.org/10.7717/peerj.16392
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author Li, Bingxia
Chen, Xinyu
Xian, Haiyu
Wen, Qitao
Wang, Tao
author_facet Li, Bingxia
Chen, Xinyu
Xian, Haiyu
Wen, Qitao
Wang, Tao
author_sort Li, Bingxia
collection PubMed
description OBJECTIVE: The sequencing panel composed of 61 target genes was used to explore the related mutation genes of oral squamous cell carcinoma (OSCC) and oral submucous fibrosis (OSF) cancerization, so as to provide a theoretical basis for the early diagnosis of oral submucous fibrosis cancerization, find the most important mutations in OSF cancerization, and more targeted prevention of OSF cancerization. METHODS: A total of 74 clinically diagnosed samples were included, including 36 cases of OSCC and 38 cases of OSF cancer patients. DNA was extracted, and targeted gene panel sequencing technology was used to analyze the gene frequency of pathogenic mutation sites in clinical samples. RESULTS: Gene panel sequencing analysis showed that there were 69 mutations in 18 genes in OSCC and OSF cancerous specimens. The results of gene panel sequencing were screened, and 18 mutant genes were finally screened out and their mutation frequencies in the samples were analyzed. According to the frequency of gene mutations from high to low, they were TP53, FLT4, PIK3CA, CDKN2A, FGFR4, HRAS, BRCA1, PTPN11, NF1, KMT2A, RB1, PTEN, MSH2, MLH1, KMT2D, FLCN, BRCA2, APC. The mutation frequency of FLT4 gene was significantly higher than that of OSCC group (P < 0.05). CONCLUSION: FLT4 gene may be related to OSF cancerization and is expected to be an early diagnostic biomarker for OSF cancerization.
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spelling pubmed-106938202023-12-04 Gene mutation analysis of oral submucous fibrosis cancerization in Hainan Island Li, Bingxia Chen, Xinyu Xian, Haiyu Wen, Qitao Wang, Tao PeerJ Bioinformatics OBJECTIVE: The sequencing panel composed of 61 target genes was used to explore the related mutation genes of oral squamous cell carcinoma (OSCC) and oral submucous fibrosis (OSF) cancerization, so as to provide a theoretical basis for the early diagnosis of oral submucous fibrosis cancerization, find the most important mutations in OSF cancerization, and more targeted prevention of OSF cancerization. METHODS: A total of 74 clinically diagnosed samples were included, including 36 cases of OSCC and 38 cases of OSF cancer patients. DNA was extracted, and targeted gene panel sequencing technology was used to analyze the gene frequency of pathogenic mutation sites in clinical samples. RESULTS: Gene panel sequencing analysis showed that there were 69 mutations in 18 genes in OSCC and OSF cancerous specimens. The results of gene panel sequencing were screened, and 18 mutant genes were finally screened out and their mutation frequencies in the samples were analyzed. According to the frequency of gene mutations from high to low, they were TP53, FLT4, PIK3CA, CDKN2A, FGFR4, HRAS, BRCA1, PTPN11, NF1, KMT2A, RB1, PTEN, MSH2, MLH1, KMT2D, FLCN, BRCA2, APC. The mutation frequency of FLT4 gene was significantly higher than that of OSCC group (P < 0.05). CONCLUSION: FLT4 gene may be related to OSF cancerization and is expected to be an early diagnostic biomarker for OSF cancerization. PeerJ Inc. 2023-11-30 /pmc/articles/PMC10693820/ /pubmed/38050610 http://dx.doi.org/10.7717/peerj.16392 Text en © 2023 Li et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited.
spellingShingle Bioinformatics
Li, Bingxia
Chen, Xinyu
Xian, Haiyu
Wen, Qitao
Wang, Tao
Gene mutation analysis of oral submucous fibrosis cancerization in Hainan Island
title Gene mutation analysis of oral submucous fibrosis cancerization in Hainan Island
title_full Gene mutation analysis of oral submucous fibrosis cancerization in Hainan Island
title_fullStr Gene mutation analysis of oral submucous fibrosis cancerization in Hainan Island
title_full_unstemmed Gene mutation analysis of oral submucous fibrosis cancerization in Hainan Island
title_short Gene mutation analysis of oral submucous fibrosis cancerization in Hainan Island
title_sort gene mutation analysis of oral submucous fibrosis cancerization in hainan island
topic Bioinformatics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10693820/
https://www.ncbi.nlm.nih.gov/pubmed/38050610
http://dx.doi.org/10.7717/peerj.16392
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