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Species identification of phlebotomine sandflies using deep learning and wing interferential pattern (WIP)

Sandflies (Diptera; Psychodidae) are medical and veterinary vectors that transmit diverse parasitic, viral, and bacterial pathogens. Their identification has always been challenging, particularly at the specific and sub-specific levels, because it relies on examining minute and mostly internal struc...

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Autores principales: Cannet, Arnaud, Simon-Chane, Camille, Histace, Aymeric, Akhoundi, Mohammad, Romain, Olivier, Souchaud, Marc, Jacob, Pierre, Sereno, Darian, Volf, Petr, Dvorak, Vit, Sereno, Denis
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10696019/
https://www.ncbi.nlm.nih.gov/pubmed/38049590
http://dx.doi.org/10.1038/s41598-023-48685-2
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author Cannet, Arnaud
Simon-Chane, Camille
Histace, Aymeric
Akhoundi, Mohammad
Romain, Olivier
Souchaud, Marc
Jacob, Pierre
Sereno, Darian
Volf, Petr
Dvorak, Vit
Sereno, Denis
author_facet Cannet, Arnaud
Simon-Chane, Camille
Histace, Aymeric
Akhoundi, Mohammad
Romain, Olivier
Souchaud, Marc
Jacob, Pierre
Sereno, Darian
Volf, Petr
Dvorak, Vit
Sereno, Denis
author_sort Cannet, Arnaud
collection PubMed
description Sandflies (Diptera; Psychodidae) are medical and veterinary vectors that transmit diverse parasitic, viral, and bacterial pathogens. Their identification has always been challenging, particularly at the specific and sub-specific levels, because it relies on examining minute and mostly internal structures. Here, to circumvent such limitations, we have evaluated the accuracy and reliability of Wing Interferential Patterns (WIPs) generated on the surface of sandfly wings in conjunction with deep learning (DL) procedures to assign specimens at various taxonomic levels. Our dataset proves that the method can accurately identify sandflies over other dipteran insects at the family, genus, subgenus, and species level with an accuracy higher than 77.0%, regardless of the taxonomic level challenged. This approach does not require inspection of internal organs to address identification, does not rely on identification keys, and can be implemented under field or near-field conditions, showing promise for sandfly pro-active and passive entomological surveys in an era of scarcity in medical entomologists.
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spelling pubmed-106960192023-12-06 Species identification of phlebotomine sandflies using deep learning and wing interferential pattern (WIP) Cannet, Arnaud Simon-Chane, Camille Histace, Aymeric Akhoundi, Mohammad Romain, Olivier Souchaud, Marc Jacob, Pierre Sereno, Darian Volf, Petr Dvorak, Vit Sereno, Denis Sci Rep Article Sandflies (Diptera; Psychodidae) are medical and veterinary vectors that transmit diverse parasitic, viral, and bacterial pathogens. Their identification has always been challenging, particularly at the specific and sub-specific levels, because it relies on examining minute and mostly internal structures. Here, to circumvent such limitations, we have evaluated the accuracy and reliability of Wing Interferential Patterns (WIPs) generated on the surface of sandfly wings in conjunction with deep learning (DL) procedures to assign specimens at various taxonomic levels. Our dataset proves that the method can accurately identify sandflies over other dipteran insects at the family, genus, subgenus, and species level with an accuracy higher than 77.0%, regardless of the taxonomic level challenged. This approach does not require inspection of internal organs to address identification, does not rely on identification keys, and can be implemented under field or near-field conditions, showing promise for sandfly pro-active and passive entomological surveys in an era of scarcity in medical entomologists. Nature Publishing Group UK 2023-12-04 /pmc/articles/PMC10696019/ /pubmed/38049590 http://dx.doi.org/10.1038/s41598-023-48685-2 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Cannet, Arnaud
Simon-Chane, Camille
Histace, Aymeric
Akhoundi, Mohammad
Romain, Olivier
Souchaud, Marc
Jacob, Pierre
Sereno, Darian
Volf, Petr
Dvorak, Vit
Sereno, Denis
Species identification of phlebotomine sandflies using deep learning and wing interferential pattern (WIP)
title Species identification of phlebotomine sandflies using deep learning and wing interferential pattern (WIP)
title_full Species identification of phlebotomine sandflies using deep learning and wing interferential pattern (WIP)
title_fullStr Species identification of phlebotomine sandflies using deep learning and wing interferential pattern (WIP)
title_full_unstemmed Species identification of phlebotomine sandflies using deep learning and wing interferential pattern (WIP)
title_short Species identification of phlebotomine sandflies using deep learning and wing interferential pattern (WIP)
title_sort species identification of phlebotomine sandflies using deep learning and wing interferential pattern (wip)
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10696019/
https://www.ncbi.nlm.nih.gov/pubmed/38049590
http://dx.doi.org/10.1038/s41598-023-48685-2
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