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Proteome-wide analysis reveals potential therapeutic targets for Colorectal cancer: a two-sample mendelian randomization study

BACKGROUND: Colorectal cancer (CRC) is a leading cause of cancer-related mortality, highlighting an unmet clinical need for more effective therapies. This study aims to evaluate the causal relationship between 4,489 plasma proteins and CRC to identify potential therapeutic targets for CRC. METHODS:...

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Autores principales: Cai, Yi-Xin, Wu, Yi-Qing, Liu, Jie, Pan, Huanle, Deng, Wenhai, Sun, Weijian, Xie, Congying, Huang, Xiu-Feng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10696874/
https://www.ncbi.nlm.nih.gov/pubmed/38049731
http://dx.doi.org/10.1186/s12885-023-11669-6
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author Cai, Yi-Xin
Wu, Yi-Qing
Liu, Jie
Pan, Huanle
Deng, Wenhai
Sun, Weijian
Xie, Congying
Huang, Xiu-Feng
author_facet Cai, Yi-Xin
Wu, Yi-Qing
Liu, Jie
Pan, Huanle
Deng, Wenhai
Sun, Weijian
Xie, Congying
Huang, Xiu-Feng
author_sort Cai, Yi-Xin
collection PubMed
description BACKGROUND: Colorectal cancer (CRC) is a leading cause of cancer-related mortality, highlighting an unmet clinical need for more effective therapies. This study aims to evaluate the causal relationship between 4,489 plasma proteins and CRC to identify potential therapeutic targets for CRC. METHODS: We conducted two-sample Mendelian randomization (MR) analysis to examine the causal effects of plasma proteins on CRC. Mediation analysis was performed to assess the indirect effects of plasma proteins on CRC through associated risk factors. In addition, we conducted a phenome-wide association study using the UK Biobank dataset to examine associations between these plasma proteins and other phenotypes. RESULTS: Out of 4,489 plasma proteins, MR analysis revealed causal associations with CRC for 23 proteins, including VIMP, MICB, TNFRSF11B, C5orf38 and SLC5A8. Our findings also confirm the associations between reported risk factors and CRC. Mediation analysis identified mediating effects of proteins on CRC outcomes through risk factors. Furthermore, MR analysis identified 154 plasma proteins are causally linked to at least one CRC risk factor. CONCLUSIONS: Our study evaluated the causal relationships between plasma proteins and CRC, providing a more complete understanding of potential therapeutic targets for CRC. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12885-023-11669-6.
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spelling pubmed-106968742023-12-06 Proteome-wide analysis reveals potential therapeutic targets for Colorectal cancer: a two-sample mendelian randomization study Cai, Yi-Xin Wu, Yi-Qing Liu, Jie Pan, Huanle Deng, Wenhai Sun, Weijian Xie, Congying Huang, Xiu-Feng BMC Cancer Research BACKGROUND: Colorectal cancer (CRC) is a leading cause of cancer-related mortality, highlighting an unmet clinical need for more effective therapies. This study aims to evaluate the causal relationship between 4,489 plasma proteins and CRC to identify potential therapeutic targets for CRC. METHODS: We conducted two-sample Mendelian randomization (MR) analysis to examine the causal effects of plasma proteins on CRC. Mediation analysis was performed to assess the indirect effects of plasma proteins on CRC through associated risk factors. In addition, we conducted a phenome-wide association study using the UK Biobank dataset to examine associations between these plasma proteins and other phenotypes. RESULTS: Out of 4,489 plasma proteins, MR analysis revealed causal associations with CRC for 23 proteins, including VIMP, MICB, TNFRSF11B, C5orf38 and SLC5A8. Our findings also confirm the associations between reported risk factors and CRC. Mediation analysis identified mediating effects of proteins on CRC outcomes through risk factors. Furthermore, MR analysis identified 154 plasma proteins are causally linked to at least one CRC risk factor. CONCLUSIONS: Our study evaluated the causal relationships between plasma proteins and CRC, providing a more complete understanding of potential therapeutic targets for CRC. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12885-023-11669-6. BioMed Central 2023-12-04 /pmc/articles/PMC10696874/ /pubmed/38049731 http://dx.doi.org/10.1186/s12885-023-11669-6 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Cai, Yi-Xin
Wu, Yi-Qing
Liu, Jie
Pan, Huanle
Deng, Wenhai
Sun, Weijian
Xie, Congying
Huang, Xiu-Feng
Proteome-wide analysis reveals potential therapeutic targets for Colorectal cancer: a two-sample mendelian randomization study
title Proteome-wide analysis reveals potential therapeutic targets for Colorectal cancer: a two-sample mendelian randomization study
title_full Proteome-wide analysis reveals potential therapeutic targets for Colorectal cancer: a two-sample mendelian randomization study
title_fullStr Proteome-wide analysis reveals potential therapeutic targets for Colorectal cancer: a two-sample mendelian randomization study
title_full_unstemmed Proteome-wide analysis reveals potential therapeutic targets for Colorectal cancer: a two-sample mendelian randomization study
title_short Proteome-wide analysis reveals potential therapeutic targets for Colorectal cancer: a two-sample mendelian randomization study
title_sort proteome-wide analysis reveals potential therapeutic targets for colorectal cancer: a two-sample mendelian randomization study
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10696874/
https://www.ncbi.nlm.nih.gov/pubmed/38049731
http://dx.doi.org/10.1186/s12885-023-11669-6
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