MINER: software for phylogenetic motif identification

MINER is web-based software for phylogenetic motif (PM) identification. PMs are sequence regions (fragments) that conserve the overall familial phylogeny. PMs have been shown to correspond to a wide variety of catalytic regions, substrate-binding sites and protein interfaces, making them ideal funct...

Descripción completa

Detalles Bibliográficos
Autores principales: La, David, Livesay, Dennis R.
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2005
Materias:
Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1160226/
https://www.ncbi.nlm.nih.gov/pubmed/15980467
http://dx.doi.org/10.1093/nar/gki465
Descripción
Sumario:MINER is web-based software for phylogenetic motif (PM) identification. PMs are sequence regions (fragments) that conserve the overall familial phylogeny. PMs have been shown to correspond to a wide variety of catalytic regions, substrate-binding sites and protein interfaces, making them ideal functional site predictions. The MINER output provides an intuitive interface for interactive PM sequence analysis and structural visualization. The web implementation of MINER is freely available at . Source code is available to the academic community on request.

Ejemplares similares