Cargando…

BASys: a web server for automated bacterial genome annotation

BASys (Bacterial Annotation System) is a web server that supports automated, in-depth annotation of bacterial genomic (chromosomal and plasmid) sequences. It accepts raw DNA sequence data and an optional list of gene identification information and provides extensive textual annotation and hyperlinke...

Descripción completa

Detalles Bibliográficos
Autores principales:	Van Domselaar, Gary H., Stothard, Paul, Shrivastava, Savita, Cruz, Joseph A., Guo, AnChi, Dong, Xiaoli, Lu, Paul, Szafron, Duane, Greiner, Russ, Wishart, David S.
Formato:	Texto
Lenguaje:	English
Publicado:	Oxford University Press 2005
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1160269/ https://www.ncbi.nlm.nih.gov/pubmed/15980511 http://dx.doi.org/10.1093/nar/gki593

Ejemplares similares

BacMap: an interactive picture atlas of annotated bacterial genomes
por: Stothard, Paul, et al.
Publicado: (2005)

The Path-A metabolic pathway prediction web server
por: Pireddu, Luca, et al.
Publicado: (2006)

PROTEUS2: a web server for comprehensive protein structure prediction and structure-based annotation
por: Montgomerie, Scott, et al.
Publicado: (2008)

CFM-ID: a web server for annotation, spectrum prediction and metabolite identification from tandem mass spectra
por: Allen, Felicity, et al.
Publicado: (2014)

MovieMaker: a web server for rapid rendering of protein motions and interactions
por: Maiti, Rajarshi, et al.
Publicado: (2005)

BacMap: an up-to-date electronic atlas of annotated bacterial genomes
por: Cruz, Joseph, et al.
Publicado: (2012)

PlasMapper 3.0—a web server for generating, editing, annotating and visualizing publication quality plasmid maps
por: Wishart, David S, et al.
Publicado: (2023)

KOBAS server: a web-based platform for automated annotation and pathway identification
por: Wu, Jianmin, et al.
Publicado: (2006)

GOmotif: A web server for investigating the biological role of protein sequence motifs
por: Bristow, Franklin, et al.
Publicado: (2011)

Alignment-Annotator web server: rendering and annotating sequence alignments
por: Gille, Christoph, et al.
Publicado: (2014)

PROSESS: a protein structure evaluation suite and server
por: Berjanskii, Mark, et al.
Publicado: (2010)

OpenAnnotate: a web server to annotate the chromatin accessibility of genomic regions
por: Chen, Shengquan, et al.
Publicado: (2021)

WebFARM: web server for finite automated restriction mapping
por: Singh, Tiratha Raj
Publicado: (2010)

FLAN: a web server for influenza virus genome annotation
por: Bao, Yiming, et al.
Publicado: (2007)

Companion: a web server for annotation and analysis of parasite genomes
por: Steinbiss, Sascha, et al.
Publicado: (2016)

PANNZER2: a rapid functional annotation web server
por: Törönen, Petri, et al.
Publicado: (2018)

Annotation of cell types (ACT): a convenient web server for cell type annotation
por: Quan, Fei, et al.
Publicado: (2023)

CFM-ID 4.0 – a web server for accurate MS-based metabolite identification
por: Wang, Fei, et al.
Publicado: (2022)

METAGENassist: a comprehensive web server for comparative metagenomics
por: Arndt, David, et al.
Publicado: (2012)

DrugBank: a comprehensive resource for in silico drug discovery and exploration
por: Wishart, David S., et al.
Publicado: (2006)

AnnotSV and knotAnnotSV: a web server for human structural variations annotations, ranking and analysis
por: Geoffroy, Véronique, et al.
Publicado: (2021)

TAIGET: A small-molecule target identification and annotation web server
por: Wei, Xuxu, et al.
Publicado: (2022)

PREDITOR: a web server for predicting protein torsion angle restraints
por: Berjanskii, Mark V., et al.
Publicado: (2006)

WS-SNPs&GO: a web server for predicting the deleterious effect of human protein variants using functional annotation
por: Capriotti, Emidio, et al.
Publicado: (2013)

GeNMR: a web server for rapid NMR-based protein structure determination
por: Berjanskii, Mark, et al.
Publicado: (2009)

MetaboAnalyst: a web server for metabolomic data analysis and interpretation
por: Xia, Jianguo, et al.
Publicado: (2009)

T3DB: a comprehensively annotated database of common toxins and their targets
por: Lim, Emilia, et al.
Publicado: (2010)

QuickSNP: an automated web server for selection of tagSNPs
por: Grover, Deepak, et al.
Publicado: (2007)

FireProt: web server for automated design of thermostable proteins
por: Musil, Milos, et al.
Publicado: (2017)

BioTransformer 3.0—a web server for accurately predicting metabolic transformation products
por: Wishart, David S, et al.
Publicado: (2022)

PA-GOSUB: a searchable database of model organism protein sequences with their predicted Gene Ontology molecular function and subcellular localization
por: Lu, Paul, et al.
Publicado: (2005)

Genomic sequence and activity of KS10, a transposable phage of the Burkholderia cepacia complex
por: Goudie, Amanda D, et al.
Publicado: (2008)

Visualizing and comparing circular genomes using the CGView family of tools
por: Stothard, Paul, et al.
Publicado: (2017)

An automated protein annotation filter for integrating web-based annotation tools
por: Saravanan, Vijayakumar, et al.
Publicado: (2007)

AVIA: an interactive web-server for annotation, visualization and impact analysis of genomic variations
por: Vuong, Hue, et al.
Publicado: (2012)

PathwAX: a web server for network crosstalk based pathway annotation
por: Ogris, Christoph, et al.
Publicado: (2016)

PIANO: A Web Server for Pseudouridine-Site (Ψ) Identification and Functional Annotation
por: Song, Bowen, et al.
Publicado: (2020)

PhaGAA: an integrated web server platform for phage genome annotation and analysis
por: Wu, Jiawei, et al.
Publicado: (2023)

wTAM: a web server for annotation of weighted human microRNAs
por: Cui, Chunmei, et al.
Publicado: (2021)

CovalentDock Cloud: a web server for automated covalent docking
por: Ouyang, Xuchang, et al.
Publicado: (2013)

Cannot write session to /tmp/vufind_sessions/sess_n7ub09r7m0ikbtt15jtqr3nbm3