The Sequence Ontology: a tool for the unification of genome annotations

The Sequence Ontology (SO) is a structured controlled vocabulary for the parts of a genomic annotation. SO provides a common set of terms and definitions that will facilitate the exchange, analysis and management of genomic data. Because SO treats part-whole relationships rigorously, data described...

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Autores principales: Eilbeck, Karen, Lewis, Suzanna E, Mungall, Christopher J, Yandell, Mark, Stein, Lincoln, Durbin, Richard, Ashburner, Michael
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2005
Materias:
Method
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1175956/
https://www.ncbi.nlm.nih.gov/pubmed/15892872
http://dx.doi.org/10.1186/gb-2005-6-5-r44
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author Eilbeck, Karen
Lewis, Suzanna E
Mungall, Christopher J
Yandell, Mark
Stein, Lincoln
Durbin, Richard
Ashburner, Michael
author_facet Eilbeck, Karen
Lewis, Suzanna E
Mungall, Christopher J
Yandell, Mark
Stein, Lincoln
Durbin, Richard
Ashburner, Michael
author_sort Eilbeck, Karen
collection PubMed
description The Sequence Ontology (SO) is a structured controlled vocabulary for the parts of a genomic annotation. SO provides a common set of terms and definitions that will facilitate the exchange, analysis and management of genomic data. Because SO treats part-whole relationships rigorously, data described with it can become substrates for automated reasoning, and instances of sequence features described by the SO can be subjected to a group of logical operations termed extensional mereology operators.
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spelling pubmed-11759562005-07-17 The Sequence Ontology: a tool for the unification of genome annotations Eilbeck, Karen Lewis, Suzanna E Mungall, Christopher J Yandell, Mark Stein, Lincoln Durbin, Richard Ashburner, Michael Genome Biol Method The Sequence Ontology (SO) is a structured controlled vocabulary for the parts of a genomic annotation. SO provides a common set of terms and definitions that will facilitate the exchange, analysis and management of genomic data. Because SO treats part-whole relationships rigorously, data described with it can become substrates for automated reasoning, and instances of sequence features described by the SO can be subjected to a group of logical operations termed extensional mereology operators. BioMed Central 2005 2005-04-29 /pmc/articles/PMC1175956/ /pubmed/15892872 http://dx.doi.org/10.1186/gb-2005-6-5-r44 Text en Copyright © 2005 Eilbeck et al.; licensee BioMed Central Ltd.
spellingShingle Method
Eilbeck, Karen
Lewis, Suzanna E
Mungall, Christopher J
Yandell, Mark
Stein, Lincoln
Durbin, Richard
Ashburner, Michael
The Sequence Ontology: a tool for the unification of genome annotations
title The Sequence Ontology: a tool for the unification of genome annotations
title_full The Sequence Ontology: a tool for the unification of genome annotations
title_fullStr The Sequence Ontology: a tool for the unification of genome annotations
title_full_unstemmed The Sequence Ontology: a tool for the unification of genome annotations
title_short The Sequence Ontology: a tool for the unification of genome annotations
title_sort sequence ontology: a tool for the unification of genome annotations
topic Method
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1175956/
https://www.ncbi.nlm.nih.gov/pubmed/15892872
http://dx.doi.org/10.1186/gb-2005-6-5-r44
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