Cargando…

Inflammatory Aetiology of Human Myometrial Activation Tested Using Directed Graphs

There are three main hypotheses for the activation of the human uterus at labour: functional progesterone withdrawal, inflammatory stimulation, and oxytocin receptor activation. To test these alternatives we have taken information and data from the literature to develop causal pathway models for the...

Descripción completa

Detalles Bibliográficos
Autores principales: Bisits, Andrew M, Smith, Roger, Mesiano, Sam, Yeo, George, Kwek, Kenneth, MacIntyre, David, Chan, Eng C
Formato: Texto
Lenguaje:English
Publicado: Public Library of Science 2005
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1185645/
https://www.ncbi.nlm.nih.gov/pubmed/16110333
http://dx.doi.org/10.1371/journal.pcbi.0010019
_version_ 1782124746163355648
author Bisits, Andrew M
Smith, Roger
Mesiano, Sam
Yeo, George
Kwek, Kenneth
MacIntyre, David
Chan, Eng C
author_facet Bisits, Andrew M
Smith, Roger
Mesiano, Sam
Yeo, George
Kwek, Kenneth
MacIntyre, David
Chan, Eng C
author_sort Bisits, Andrew M
collection PubMed
description There are three main hypotheses for the activation of the human uterus at labour: functional progesterone withdrawal, inflammatory stimulation, and oxytocin receptor activation. To test these alternatives we have taken information and data from the literature to develop causal pathway models for the activation of human myometrium. The data provided quantitative RT-PCR results on key genes from samples taken before and during labour. Principal component analysis showed that pre-labour samples form a homogenous group compared to those during labour. We therefore modelled the alternative causal pathways in non-labouring samples using directed graphs and statistically compared the likelihood of the different models using structural equations and D-separation approaches. Using the computer program LISREL, inflammatory activation as a primary event was highly consistent with the data (p = 0.925), progesterone withdrawal, as a primary event, is plausible (p = 0.499), yet comparatively unlikely, oxytocin receptor mediated initiation is less compatible with the data (p = 0.091). DGraph, a software program that creates directed graphs, produced similar results (p = 0.684, p = 0.280, and p = 0.04, respectively). This outcome supports an inflammatory aetiology for human labour. Our results demonstrate the value of directed graphs in determining the likelihood of causal relationships in biology in situations where experiments are not possible.
format Text
id pubmed-1185645
institution National Center for Biotechnology Information
language English
publishDate 2005
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-11856452005-08-17 Inflammatory Aetiology of Human Myometrial Activation Tested Using Directed Graphs Bisits, Andrew M Smith, Roger Mesiano, Sam Yeo, George Kwek, Kenneth MacIntyre, David Chan, Eng C PLoS Comput Biol Research Article There are three main hypotheses for the activation of the human uterus at labour: functional progesterone withdrawal, inflammatory stimulation, and oxytocin receptor activation. To test these alternatives we have taken information and data from the literature to develop causal pathway models for the activation of human myometrium. The data provided quantitative RT-PCR results on key genes from samples taken before and during labour. Principal component analysis showed that pre-labour samples form a homogenous group compared to those during labour. We therefore modelled the alternative causal pathways in non-labouring samples using directed graphs and statistically compared the likelihood of the different models using structural equations and D-separation approaches. Using the computer program LISREL, inflammatory activation as a primary event was highly consistent with the data (p = 0.925), progesterone withdrawal, as a primary event, is plausible (p = 0.499), yet comparatively unlikely, oxytocin receptor mediated initiation is less compatible with the data (p = 0.091). DGraph, a software program that creates directed graphs, produced similar results (p = 0.684, p = 0.280, and p = 0.04, respectively). This outcome supports an inflammatory aetiology for human labour. Our results demonstrate the value of directed graphs in determining the likelihood of causal relationships in biology in situations where experiments are not possible. Public Library of Science 2005-07 2005-07-22 /pmc/articles/PMC1185645/ /pubmed/16110333 http://dx.doi.org/10.1371/journal.pcbi.0010019 Text en Copyright: © 2005 Bisits et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Bisits, Andrew M
Smith, Roger
Mesiano, Sam
Yeo, George
Kwek, Kenneth
MacIntyre, David
Chan, Eng C
Inflammatory Aetiology of Human Myometrial Activation Tested Using Directed Graphs
title Inflammatory Aetiology of Human Myometrial Activation Tested Using Directed Graphs
title_full Inflammatory Aetiology of Human Myometrial Activation Tested Using Directed Graphs
title_fullStr Inflammatory Aetiology of Human Myometrial Activation Tested Using Directed Graphs
title_full_unstemmed Inflammatory Aetiology of Human Myometrial Activation Tested Using Directed Graphs
title_short Inflammatory Aetiology of Human Myometrial Activation Tested Using Directed Graphs
title_sort inflammatory aetiology of human myometrial activation tested using directed graphs
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1185645/
https://www.ncbi.nlm.nih.gov/pubmed/16110333
http://dx.doi.org/10.1371/journal.pcbi.0010019
work_keys_str_mv AT bisitsandrewm inflammatoryaetiologyofhumanmyometrialactivationtestedusingdirectedgraphs
AT smithroger inflammatoryaetiologyofhumanmyometrialactivationtestedusingdirectedgraphs
AT mesianosam inflammatoryaetiologyofhumanmyometrialactivationtestedusingdirectedgraphs
AT yeogeorge inflammatoryaetiologyofhumanmyometrialactivationtestedusingdirectedgraphs
AT kwekkenneth inflammatoryaetiologyofhumanmyometrialactivationtestedusingdirectedgraphs
AT macintyredavid inflammatoryaetiologyofhumanmyometrialactivationtestedusingdirectedgraphs
AT chanengc inflammatoryaetiologyofhumanmyometrialactivationtestedusingdirectedgraphs