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Specificity prediction of adenylation domains in nonribosomal peptide synthetases (NRPS) using transductive support vector machines (TSVMs)

We present a new support vector machine (SVM)-based approach to predict the substrate specificity of subtypes of a given protein sequence family. We demonstrate the usefulness of this method on the example of aryl acid-activating and amino acid-activating adenylation domains (A domains) of nonriboso...

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Detalles Bibliográficos
Autores principales: Rausch, Christian, Weber, Tilmann, Kohlbacher, Oliver, Wohlleben, Wolfgang, Huson, Daniel H.
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2005
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1253831/
https://www.ncbi.nlm.nih.gov/pubmed/16221976
http://dx.doi.org/10.1093/nar/gki885