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Identification of Schistosoma mansoni gender-associated gene transcripts by cDNA microarray profiling

BACKGROUND: Parasitic helminths of the genus Schistosoma mate, achieve sexual maturity and produce eggs in the bloodstream of their definitive hosts, and the most important pathological consequences of the infection are associated with this process. We have used cDNA microarray technology to initiat...

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Detalles Bibliográficos
Autores principales: Hoffmann, Karl F, Johnston, David A, Dunne, David W
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2002
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC126235/
https://www.ncbi.nlm.nih.gov/pubmed/12186648
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author Hoffmann, Karl F
Johnston, David A
Dunne, David W
author_facet Hoffmann, Karl F
Johnston, David A
Dunne, David W
author_sort Hoffmann, Karl F
collection PubMed
description BACKGROUND: Parasitic helminths of the genus Schistosoma mate, achieve sexual maturity and produce eggs in the bloodstream of their definitive hosts, and the most important pathological consequences of the infection are associated with this process. We have used cDNA microarray technology to initiate genome-wide gene-expression studies of sex and sexual development in mature Schistosoma mansoni parasites. RESULTS: An S. mansoni-specific cDNA microarray was fabricated using 576 expressed sequence tags selected from three cDNA libraries and originating from two different parasite developmental stages. Five independent cDNA microarray hybridizations were analyzed using stringent filtering criteria and careful quality control, leading to the identification of 12 new female-associated and 4 new male-associated gene transcripts in the mature adult schistosome. Statistical analysis of variation demonstrated high levels of agreement within a cDNA microarray (correlation coefficient 0.91; median coefficient of variation 11.1%) and between cDNA microarrays (correlation coefficient 0.90; median coefficient of variation 14.4%). RT-PCR analysis confirmed the cDNA microarray results, thereby supporting the reliability of the system. CONCLUSIONS: Our study expands the list of S. mansoni gender-associated gene transcripts from all previous studies by a factor of two. Among the new associations identified, a tyrosinase ortholog was preferentially expressed in the adult female, and a dynein light-chain ortholog was highly induced in the adult male. cDNA microarrays offer the potential for exponential leaps in the understanding of parasite biology and this study shows how molecules involved in sexual biology can be rapidly identified.
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spelling pubmed-1262352002-09-25 Identification of Schistosoma mansoni gender-associated gene transcripts by cDNA microarray profiling Hoffmann, Karl F Johnston, David A Dunne, David W Genome Biol Research BACKGROUND: Parasitic helminths of the genus Schistosoma mate, achieve sexual maturity and produce eggs in the bloodstream of their definitive hosts, and the most important pathological consequences of the infection are associated with this process. We have used cDNA microarray technology to initiate genome-wide gene-expression studies of sex and sexual development in mature Schistosoma mansoni parasites. RESULTS: An S. mansoni-specific cDNA microarray was fabricated using 576 expressed sequence tags selected from three cDNA libraries and originating from two different parasite developmental stages. Five independent cDNA microarray hybridizations were analyzed using stringent filtering criteria and careful quality control, leading to the identification of 12 new female-associated and 4 new male-associated gene transcripts in the mature adult schistosome. Statistical analysis of variation demonstrated high levels of agreement within a cDNA microarray (correlation coefficient 0.91; median coefficient of variation 11.1%) and between cDNA microarrays (correlation coefficient 0.90; median coefficient of variation 14.4%). RT-PCR analysis confirmed the cDNA microarray results, thereby supporting the reliability of the system. CONCLUSIONS: Our study expands the list of S. mansoni gender-associated gene transcripts from all previous studies by a factor of two. Among the new associations identified, a tyrosinase ortholog was preferentially expressed in the adult female, and a dynein light-chain ortholog was highly induced in the adult male. cDNA microarrays offer the potential for exponential leaps in the understanding of parasite biology and this study shows how molecules involved in sexual biology can be rapidly identified. BioMed Central 2002 2002-07-25 /pmc/articles/PMC126235/ /pubmed/12186648 Text en Copyright © 2002 Hoffmann et al., licensee BioMed Central Ltd
spellingShingle Research
Hoffmann, Karl F
Johnston, David A
Dunne, David W
Identification of Schistosoma mansoni gender-associated gene transcripts by cDNA microarray profiling
title Identification of Schistosoma mansoni gender-associated gene transcripts by cDNA microarray profiling
title_full Identification of Schistosoma mansoni gender-associated gene transcripts by cDNA microarray profiling
title_fullStr Identification of Schistosoma mansoni gender-associated gene transcripts by cDNA microarray profiling
title_full_unstemmed Identification of Schistosoma mansoni gender-associated gene transcripts by cDNA microarray profiling
title_short Identification of Schistosoma mansoni gender-associated gene transcripts by cDNA microarray profiling
title_sort identification of schistosoma mansoni gender-associated gene transcripts by cdna microarray profiling
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC126235/
https://www.ncbi.nlm.nih.gov/pubmed/12186648
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