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Quantitative Analysis of Genetic and Neuronal Multi-Perturbation Experiments

Perturbation studies, in which functional performance is measured after deletion, mutation, or lesion of elements of a biological system, have been traditionally employed in many fields in biology. The vast majority of these studies have been qualitative and have employed single perturbations, often...

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Autores principales: Kaufman, Alon, Keinan, Alon, Meilijson, Isaac, Kupiec, Martin, Ruppin, Eytan
Formato: Texto
Lenguaje:English
Publicado: Public Library of Science 2005
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1289391/
https://www.ncbi.nlm.nih.gov/pubmed/16322764
http://dx.doi.org/10.1371/journal.pcbi.0010064
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author Kaufman, Alon
Keinan, Alon
Meilijson, Isaac
Kupiec, Martin
Ruppin, Eytan
author_facet Kaufman, Alon
Keinan, Alon
Meilijson, Isaac
Kupiec, Martin
Ruppin, Eytan
author_sort Kaufman, Alon
collection PubMed
description Perturbation studies, in which functional performance is measured after deletion, mutation, or lesion of elements of a biological system, have been traditionally employed in many fields in biology. The vast majority of these studies have been qualitative and have employed single perturbations, often resulting in little phenotypic effect. Recently, newly emerging experimental techniques have allowed researchers to carry out concomitant multi-perturbations and to uncover the causal functional contributions of system elements. This study presents a rigorous and quantitative multi-perturbation analysis of gene knockout and neuronal ablation experiments. In both cases, a quantification of the elements' contributions, and new insights and predictions, are provided. Multi-perturbation analysis has a potentially wide range of applications and is gradually becoming an essential tool in biology.
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spelling pubmed-12893912005-12-01 Quantitative Analysis of Genetic and Neuronal Multi-Perturbation Experiments Kaufman, Alon Keinan, Alon Meilijson, Isaac Kupiec, Martin Ruppin, Eytan PLoS Comput Biol Research Article Perturbation studies, in which functional performance is measured after deletion, mutation, or lesion of elements of a biological system, have been traditionally employed in many fields in biology. The vast majority of these studies have been qualitative and have employed single perturbations, often resulting in little phenotypic effect. Recently, newly emerging experimental techniques have allowed researchers to carry out concomitant multi-perturbations and to uncover the causal functional contributions of system elements. This study presents a rigorous and quantitative multi-perturbation analysis of gene knockout and neuronal ablation experiments. In both cases, a quantification of the elements' contributions, and new insights and predictions, are provided. Multi-perturbation analysis has a potentially wide range of applications and is gradually becoming an essential tool in biology. Public Library of Science 2005-11 2005-11-25 /pmc/articles/PMC1289391/ /pubmed/16322764 http://dx.doi.org/10.1371/journal.pcbi.0010064 Text en Copyright: © 2005 Kaufman et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.
spellingShingle Research Article
Kaufman, Alon
Keinan, Alon
Meilijson, Isaac
Kupiec, Martin
Ruppin, Eytan
Quantitative Analysis of Genetic and Neuronal Multi-Perturbation Experiments
title Quantitative Analysis of Genetic and Neuronal Multi-Perturbation Experiments
title_full Quantitative Analysis of Genetic and Neuronal Multi-Perturbation Experiments
title_fullStr Quantitative Analysis of Genetic and Neuronal Multi-Perturbation Experiments
title_full_unstemmed Quantitative Analysis of Genetic and Neuronal Multi-Perturbation Experiments
title_short Quantitative Analysis of Genetic and Neuronal Multi-Perturbation Experiments
title_sort quantitative analysis of genetic and neuronal multi-perturbation experiments
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1289391/
https://www.ncbi.nlm.nih.gov/pubmed/16322764
http://dx.doi.org/10.1371/journal.pcbi.0010064
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