Cargando…

WebArray: an online platform for microarray data analysis

BACKGROUND: Many cutting-edge microarray analysis tools and algorithms, including commonly used limma and affy packages in Bioconductor, need sophisticated knowledge of mathematics, statistics and computer skills for implementation. Commercially available software can provide a user-friendly interfa...

Descripción completa

Detalles Bibliográficos
Autores principales:	Xia, Xiaoqin, McClelland, Michael, Wang, Yipeng
Formato:	Texto
Lenguaje:	English
Publicado:	BioMed Central 2005
Materias:	Software
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1327694/ https://www.ncbi.nlm.nih.gov/pubmed/16371165 http://dx.doi.org/10.1186/1471-2105-6-306

Ejemplares similares

ArrayQuest: a web resource for the analysis of DNA microarray data
por: Argraves, Gary L, et al.
Publicado: (2005)

TabSQL: a MySQL tool to facilitate mapping user data to public databases
por: Xia, Xiao-Qin, et al.
Publicado: (2010)

arrayCGHbase: an analysis platform for comparative genomic hybridization microarrays
por: Menten, Björn, et al.
Publicado: (2005)

Web-TCGA: an online platform for integrated analysis of molecular cancer data sets
por: Deng, Mario, et al.
Publicado: (2016)

virtualArray: a R/bioconductor package to merge raw data from different microarray platforms
por: Heider, Andreas, et al.
Publicado: (2013)

CTen: a web-based platform for identifying enriched cell types from heterogeneous microarray data
por: Shoemaker, Jason E, et al.
Publicado: (2012)

BioArray Software Environment (BASE): a platform for comprehensive management and analysis of microarray data
por: Saal, Lao H, et al.
Publicado: (2002)

Tilescope: online analysis pipeline for high-density tiling microarray data
por: Zhang, Zhengdong D, et al.
Publicado: (2007)

GeneXplorer: an interactive web application for microarray data visualization and analysis
por: Rees, Christian A, et al.
Publicado: (2004)

ArrayMining: a modular web-application for microarray analysis combining ensemble and consensus methods with cross-study normalization
por: Glaab, Enrico, et al.
Publicado: (2009)

Gene ARMADA: an integrated multi-analysis platform for microarray data implemented in MATLAB
por: Chatziioannou, Aristotelis, et al.
Publicado: (2009)

A web-based system for tissue microarray data management
por: Della Mea, Vincenzo, et al.
Publicado: (2006)

EzArray: A web-based highly automated Affymetrix expression array data management and analysis system
por: Zhu, Yuerong, et al.
Publicado: (2008)

ExonMiner: Web service for analysis of GeneChip Exon array data
por: Numata, Kazuyuki, et al.
Publicado: (2008)

amica: an interactive and user-friendly web-platform for the analysis of proteomics data
por: Didusch, Sebastian, et al.
Publicado: (2022)

ExpressionPlot: a web-based framework for analysis of RNA-Seq and microarray gene expression data
por: Friedman, Brad A, et al.
Publicado: (2011)

MADA: a web service for analysing DNA methylation array data
por: Hu, Xinyu, et al.
Publicado: (2020)

Array2BIO: from microarray expression data to functional annotation of co-regulated genes
por: Loots, Gabriela G, et al.
Publicado: (2006)

Genomics Portals: integrative web-platform for mining genomics data
por: Shinde, Kaustubh, et al.
Publicado: (2010)

ArrayIDer: automated structural re-annotation pipeline for DNA microarrays
por: van den Berg, Bart HJ, et al.
Publicado: (2009)

NASQAR: a web-based platform for high-throughput sequencing data analysis and visualization
por: Yousif, Ayman, et al.
Publicado: (2020)

bioWeb3D: an online webGL 3D data visualisation tool
por: Pettit, Jean-Baptiste, et al.
Publicado: (2013)

DNA microarray integromics analysis platform
por: Waller, Tomasz, et al.
Publicado: (2015)

ArrayD: A general purpose software for Microarray design
por: Sharma, Anu, et al.
Publicado: (2004)

CARMA: A platform for analyzing microarray datasets that incorporate replicate measures
por: Greer, Kevin A, et al.
Publicado: (2006)

The tissue micro-array data exchange specification: a web based experience browsing imported data
por: Nohle, David G, et al.
Publicado: (2005)

Array-A-Lizer: A serial DNA microarray quality analyzer
por: Petri, Andreas, et al.
Publicado: (2004)

PAWER: protein array web exploreR
por: Fishman, Dmytro, et al.
Publicado: (2020)

JBrowse: a dynamic web platform for genome visualization and analysis
por: Buels, Robert, et al.
Publicado: (2016)

TAMEE: data management and analysis for tissue microarrays
por: Thallinger, Gerhard G, et al.
Publicado: (2007)

Web Apollo: a web-based genomic annotation editing platform
por: Lee, Eduardo, et al.
Publicado: (2013)

SimArray: a user-friendly and user-configurable microarray design tool
por: Auburn, Richard P, et al.
Publicado: (2006)

CNV-WebStore: Online CNV Analysis, Storage and Interpretation
por: Vandeweyer, Geert, et al.
Publicado: (2011)

EST2uni: an open, parallel tool for automated EST analysis and database creation, with a data mining web interface and microarray expression data integration
por: Forment, Javier, et al.
Publicado: (2008)

Microbial Diagnostic Array Workstation (MDAW): a web server for diagnostic array data storage, sharing and analysis
por: Scaria, Joy, et al.
Publicado: (2008)

GeneTrailExpress: a web-based pipeline for the statistical evaluation of microarray experiments
por: Keller, Andreas, et al.
Publicado: (2008)

QueryOR: a comprehensive web platform for genetic variant analysis and prioritization
por: Bertoldi, Loris, et al.
Publicado: (2017)

MetaNET - a web-accessible interactive platform for biological metabolic network analysis
por: Narang, Pankaj, et al.
Publicado: (2014)

EXPANDER – an integrative program suite for microarray data analysis
por: Shamir, Ron, et al.
Publicado: (2005)

Matching of array CGH and gene expression microarray features for the purpose of integrative genomic analyses
por: van Wieringen, Wessel N, et al.
Publicado: (2012)

Cannot write session to /tmp/vufind_sessions/sess_otqs9o1rakenurvnph14lj0j82