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FGDB: a comprehensive fungal genome resource on the plant pathogen Fusarium graminearum
The MIPS Fusarium graminearum Genome Database (FGDB) is a comprehensive genome database on one of the most devastating fungal plant pathogens of wheat and barley. FGDB provides information on two gene sets independently derived by automated annotation of the F.graminearum genome sequence. A complete...
Autores principales: | , , , , , , , |
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Formato: | Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2006
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1347389/ https://www.ncbi.nlm.nih.gov/pubmed/16381910 http://dx.doi.org/10.1093/nar/gkj026 |
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author | Güldener, Ulrich Mannhaupt, Gertrud Münsterkötter, Martin Haase, Dirk Oesterheld, Matthias Stümpflen, Volker Mewes, Hans-Werner Adam, Gerhard |
author_facet | Güldener, Ulrich Mannhaupt, Gertrud Münsterkötter, Martin Haase, Dirk Oesterheld, Matthias Stümpflen, Volker Mewes, Hans-Werner Adam, Gerhard |
author_sort | Güldener, Ulrich |
collection | PubMed |
description | The MIPS Fusarium graminearum Genome Database (FGDB) is a comprehensive genome database on one of the most devastating fungal plant pathogens of wheat and barley. FGDB provides information on two gene sets independently derived by automated annotation of the F.graminearum genome sequence. A complete manually revised gene set will be completed within the near future. The initial results of systematic manual correction of gene calls are already part of the current gene set. The database can be accessed to retrieve information from bioinformatics analyses and functional classifications of the proteins. The data are also organized in the well established MIPS catalogs and novel query techniques are available to search the data. The comprehensive set of gene calls was also used for the design of an Affymetrix GeneChip. The resource is accessible on . |
format | Text |
id | pubmed-1347389 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2006 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-13473892006-01-25 FGDB: a comprehensive fungal genome resource on the plant pathogen Fusarium graminearum Güldener, Ulrich Mannhaupt, Gertrud Münsterkötter, Martin Haase, Dirk Oesterheld, Matthias Stümpflen, Volker Mewes, Hans-Werner Adam, Gerhard Nucleic Acids Res Article The MIPS Fusarium graminearum Genome Database (FGDB) is a comprehensive genome database on one of the most devastating fungal plant pathogens of wheat and barley. FGDB provides information on two gene sets independently derived by automated annotation of the F.graminearum genome sequence. A complete manually revised gene set will be completed within the near future. The initial results of systematic manual correction of gene calls are already part of the current gene set. The database can be accessed to retrieve information from bioinformatics analyses and functional classifications of the proteins. The data are also organized in the well established MIPS catalogs and novel query techniques are available to search the data. The comprehensive set of gene calls was also used for the design of an Affymetrix GeneChip. The resource is accessible on . Oxford University Press 2006-01-01 2005-12-28 /pmc/articles/PMC1347389/ /pubmed/16381910 http://dx.doi.org/10.1093/nar/gkj026 Text en © The Author 2006. Published by Oxford University Press. All rights reserved |
spellingShingle | Article Güldener, Ulrich Mannhaupt, Gertrud Münsterkötter, Martin Haase, Dirk Oesterheld, Matthias Stümpflen, Volker Mewes, Hans-Werner Adam, Gerhard FGDB: a comprehensive fungal genome resource on the plant pathogen Fusarium graminearum |
title | FGDB: a comprehensive fungal genome resource on the plant pathogen Fusarium graminearum |
title_full | FGDB: a comprehensive fungal genome resource on the plant pathogen Fusarium graminearum |
title_fullStr | FGDB: a comprehensive fungal genome resource on the plant pathogen Fusarium graminearum |
title_full_unstemmed | FGDB: a comprehensive fungal genome resource on the plant pathogen Fusarium graminearum |
title_short | FGDB: a comprehensive fungal genome resource on the plant pathogen Fusarium graminearum |
title_sort | fgdb: a comprehensive fungal genome resource on the plant pathogen fusarium graminearum |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1347389/ https://www.ncbi.nlm.nih.gov/pubmed/16381910 http://dx.doi.org/10.1093/nar/gkj026 |
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