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FGDB: a comprehensive fungal genome resource on the plant pathogen Fusarium graminearum

The MIPS Fusarium graminearum Genome Database (FGDB) is a comprehensive genome database on one of the most devastating fungal plant pathogens of wheat and barley. FGDB provides information on two gene sets independently derived by automated annotation of the F.graminearum genome sequence. A complete...

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Autores principales: Güldener, Ulrich, Mannhaupt, Gertrud, Münsterkötter, Martin, Haase, Dirk, Oesterheld, Matthias, Stümpflen, Volker, Mewes, Hans-Werner, Adam, Gerhard
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2006
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1347389/
https://www.ncbi.nlm.nih.gov/pubmed/16381910
http://dx.doi.org/10.1093/nar/gkj026
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author Güldener, Ulrich
Mannhaupt, Gertrud
Münsterkötter, Martin
Haase, Dirk
Oesterheld, Matthias
Stümpflen, Volker
Mewes, Hans-Werner
Adam, Gerhard
author_facet Güldener, Ulrich
Mannhaupt, Gertrud
Münsterkötter, Martin
Haase, Dirk
Oesterheld, Matthias
Stümpflen, Volker
Mewes, Hans-Werner
Adam, Gerhard
author_sort Güldener, Ulrich
collection PubMed
description The MIPS Fusarium graminearum Genome Database (FGDB) is a comprehensive genome database on one of the most devastating fungal plant pathogens of wheat and barley. FGDB provides information on two gene sets independently derived by automated annotation of the F.graminearum genome sequence. A complete manually revised gene set will be completed within the near future. The initial results of systematic manual correction of gene calls are already part of the current gene set. The database can be accessed to retrieve information from bioinformatics analyses and functional classifications of the proteins. The data are also organized in the well established MIPS catalogs and novel query techniques are available to search the data. The comprehensive set of gene calls was also used for the design of an Affymetrix GeneChip. The resource is accessible on .
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spelling pubmed-13473892006-01-25 FGDB: a comprehensive fungal genome resource on the plant pathogen Fusarium graminearum Güldener, Ulrich Mannhaupt, Gertrud Münsterkötter, Martin Haase, Dirk Oesterheld, Matthias Stümpflen, Volker Mewes, Hans-Werner Adam, Gerhard Nucleic Acids Res Article The MIPS Fusarium graminearum Genome Database (FGDB) is a comprehensive genome database on one of the most devastating fungal plant pathogens of wheat and barley. FGDB provides information on two gene sets independently derived by automated annotation of the F.graminearum genome sequence. A complete manually revised gene set will be completed within the near future. The initial results of systematic manual correction of gene calls are already part of the current gene set. The database can be accessed to retrieve information from bioinformatics analyses and functional classifications of the proteins. The data are also organized in the well established MIPS catalogs and novel query techniques are available to search the data. The comprehensive set of gene calls was also used for the design of an Affymetrix GeneChip. The resource is accessible on . Oxford University Press 2006-01-01 2005-12-28 /pmc/articles/PMC1347389/ /pubmed/16381910 http://dx.doi.org/10.1093/nar/gkj026 Text en © The Author 2006. Published by Oxford University Press. All rights reserved
spellingShingle Article
Güldener, Ulrich
Mannhaupt, Gertrud
Münsterkötter, Martin
Haase, Dirk
Oesterheld, Matthias
Stümpflen, Volker
Mewes, Hans-Werner
Adam, Gerhard
FGDB: a comprehensive fungal genome resource on the plant pathogen Fusarium graminearum
title FGDB: a comprehensive fungal genome resource on the plant pathogen Fusarium graminearum
title_full FGDB: a comprehensive fungal genome resource on the plant pathogen Fusarium graminearum
title_fullStr FGDB: a comprehensive fungal genome resource on the plant pathogen Fusarium graminearum
title_full_unstemmed FGDB: a comprehensive fungal genome resource on the plant pathogen Fusarium graminearum
title_short FGDB: a comprehensive fungal genome resource on the plant pathogen Fusarium graminearum
title_sort fgdb: a comprehensive fungal genome resource on the plant pathogen fusarium graminearum
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1347389/
https://www.ncbi.nlm.nih.gov/pubmed/16381910
http://dx.doi.org/10.1093/nar/gkj026
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