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The University of Minnesota Biocatalysis/Biodegradation Database: the first decade

As the University of Minnesota Biocatalysis/Biodegradation Database (UM-BBD, ) starts its second decade, it includes information on over 900 compounds, over 600 enzymes, nearly 1000 reactions and about 350 microorganism entries. Its Biochemical Periodic Tables have grown to include biological inform...

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Detalles Bibliográficos
Autores principales: Ellis, Lynda B. M., Roe, Dave, Wackett, Lawrence P.
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2006
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1347439/
https://www.ncbi.nlm.nih.gov/pubmed/16381924
http://dx.doi.org/10.1093/nar/gkj076
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author Ellis, Lynda B. M.
Roe, Dave
Wackett, Lawrence P.
author_facet Ellis, Lynda B. M.
Roe, Dave
Wackett, Lawrence P.
author_sort Ellis, Lynda B. M.
collection PubMed
description As the University of Minnesota Biocatalysis/Biodegradation Database (UM-BBD, ) starts its second decade, it includes information on over 900 compounds, over 600 enzymes, nearly 1000 reactions and about 350 microorganism entries. Its Biochemical Periodic Tables have grown to include biological information for almost all stable, non-noble-gas elements (). Its Pathway Prediction System (PPS) () is now an internationally recognized, open system for predicting microbial catabolism of organic compounds. Graphical display of PPS rules, a stand-alone version of the PPS and guidance for PPS users are being developed. The next decade should see the PPS, and the UM-BBD on which it is based, find increasing use by national and international government agencies, commercial organizations and educational institutions.
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spelling pubmed-13474392006-01-25 The University of Minnesota Biocatalysis/Biodegradation Database: the first decade Ellis, Lynda B. M. Roe, Dave Wackett, Lawrence P. Nucleic Acids Res Article As the University of Minnesota Biocatalysis/Biodegradation Database (UM-BBD, ) starts its second decade, it includes information on over 900 compounds, over 600 enzymes, nearly 1000 reactions and about 350 microorganism entries. Its Biochemical Periodic Tables have grown to include biological information for almost all stable, non-noble-gas elements (). Its Pathway Prediction System (PPS) () is now an internationally recognized, open system for predicting microbial catabolism of organic compounds. Graphical display of PPS rules, a stand-alone version of the PPS and guidance for PPS users are being developed. The next decade should see the PPS, and the UM-BBD on which it is based, find increasing use by national and international government agencies, commercial organizations and educational institutions. Oxford University Press 2006-01-01 2005-12-28 /pmc/articles/PMC1347439/ /pubmed/16381924 http://dx.doi.org/10.1093/nar/gkj076 Text en © The Author 2006. Published by Oxford University Press. All rights reserved
spellingShingle Article
Ellis, Lynda B. M.
Roe, Dave
Wackett, Lawrence P.
The University of Minnesota Biocatalysis/Biodegradation Database: the first decade
title The University of Minnesota Biocatalysis/Biodegradation Database: the first decade
title_full The University of Minnesota Biocatalysis/Biodegradation Database: the first decade
title_fullStr The University of Minnesota Biocatalysis/Biodegradation Database: the first decade
title_full_unstemmed The University of Minnesota Biocatalysis/Biodegradation Database: the first decade
title_short The University of Minnesota Biocatalysis/Biodegradation Database: the first decade
title_sort university of minnesota biocatalysis/biodegradation database: the first decade
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1347439/
https://www.ncbi.nlm.nih.gov/pubmed/16381924
http://dx.doi.org/10.1093/nar/gkj076
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