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CryptoDB: a Cryptosporidium bioinformatics resource update
The database, CryptoDB (), is a community bioinformatics resource for the AIDS-related apicomplexan-parasite, Cryptosporidium. CryptoDB integrates whole genome sequence and annotation with expressed sequence tag and genome survey sequence data and provides supplemental bioinformatics analyses and da...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2006
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1347441/ https://www.ncbi.nlm.nih.gov/pubmed/16381902 http://dx.doi.org/10.1093/nar/gkj078 |
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author | Heiges, Mark Wang, Haiming Robinson, Edward Aurrecoechea, Cristina Gao, Xin Kaluskar, Nivedita Rhodes, Philippa Wang, Sammy He, Cong-Zhou Su, Yanqi Miller, John Kraemer, Eileen Kissinger, Jessica C. |
author_facet | Heiges, Mark Wang, Haiming Robinson, Edward Aurrecoechea, Cristina Gao, Xin Kaluskar, Nivedita Rhodes, Philippa Wang, Sammy He, Cong-Zhou Su, Yanqi Miller, John Kraemer, Eileen Kissinger, Jessica C. |
author_sort | Heiges, Mark |
collection | PubMed |
description | The database, CryptoDB (), is a community bioinformatics resource for the AIDS-related apicomplexan-parasite, Cryptosporidium. CryptoDB integrates whole genome sequence and annotation with expressed sequence tag and genome survey sequence data and provides supplemental bioinformatics analyses and data-mining tools. A simple, yet comprehensive web interface is available for mining and visualizing the data. CryptoDB is allied with the databases PlasmoDB and ToxoDB via ApiDB, an NIH/NIAID-fundedBioinformatics Resource Center. Recent updates to CryptoDB include the deposition of annotated genome sequences for Cryptosporidium parvum and Cryptosporidium hominis, migration to a relational database (GUS), a new query and visualization interface and the introduction of Web services. |
format | Text |
id | pubmed-1347441 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2006 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-13474412006-01-25 CryptoDB: a Cryptosporidium bioinformatics resource update Heiges, Mark Wang, Haiming Robinson, Edward Aurrecoechea, Cristina Gao, Xin Kaluskar, Nivedita Rhodes, Philippa Wang, Sammy He, Cong-Zhou Su, Yanqi Miller, John Kraemer, Eileen Kissinger, Jessica C. Nucleic Acids Res Article The database, CryptoDB (), is a community bioinformatics resource for the AIDS-related apicomplexan-parasite, Cryptosporidium. CryptoDB integrates whole genome sequence and annotation with expressed sequence tag and genome survey sequence data and provides supplemental bioinformatics analyses and data-mining tools. A simple, yet comprehensive web interface is available for mining and visualizing the data. CryptoDB is allied with the databases PlasmoDB and ToxoDB via ApiDB, an NIH/NIAID-fundedBioinformatics Resource Center. Recent updates to CryptoDB include the deposition of annotated genome sequences for Cryptosporidium parvum and Cryptosporidium hominis, migration to a relational database (GUS), a new query and visualization interface and the introduction of Web services. Oxford University Press 2006-01-01 2005-12-28 /pmc/articles/PMC1347441/ /pubmed/16381902 http://dx.doi.org/10.1093/nar/gkj078 Text en © The Author 2006. Published by Oxford University Press. All rights reserved |
spellingShingle | Article Heiges, Mark Wang, Haiming Robinson, Edward Aurrecoechea, Cristina Gao, Xin Kaluskar, Nivedita Rhodes, Philippa Wang, Sammy He, Cong-Zhou Su, Yanqi Miller, John Kraemer, Eileen Kissinger, Jessica C. CryptoDB: a Cryptosporidium bioinformatics resource update |
title | CryptoDB: a Cryptosporidium bioinformatics resource update |
title_full | CryptoDB: a Cryptosporidium bioinformatics resource update |
title_fullStr | CryptoDB: a Cryptosporidium bioinformatics resource update |
title_full_unstemmed | CryptoDB: a Cryptosporidium bioinformatics resource update |
title_short | CryptoDB: a Cryptosporidium bioinformatics resource update |
title_sort | cryptodb: a cryptosporidium bioinformatics resource update |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1347441/ https://www.ncbi.nlm.nih.gov/pubmed/16381902 http://dx.doi.org/10.1093/nar/gkj078 |
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