ProTherm and ProNIT: thermodynamic databases for proteins and protein–nucleic acid interactions

ProTherm and ProNIT are two thermodynamic databases that contain experimentally determined thermodynamic parameters of protein stability and protein–nucleic acid interactions, respectively. The current versions of both the databases have considerably increased the total number of entries and enhance...

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Detalles Bibliográficos
Autores principales: Kumar, M. D. Shaji, Bava, K. Abdulla, Gromiha, M. Michael, Prabakaran, Ponraj, Kitajima, Koji, Uedaira, Hatsuho, Sarai, Akinori
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2006
Materias:
Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1347465/
https://www.ncbi.nlm.nih.gov/pubmed/16381846
http://dx.doi.org/10.1093/nar/gkj103
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author Kumar, M. D. Shaji
Bava, K. Abdulla
Gromiha, M. Michael
Prabakaran, Ponraj
Kitajima, Koji
Uedaira, Hatsuho
Sarai, Akinori
author_facet Kumar, M. D. Shaji
Bava, K. Abdulla
Gromiha, M. Michael
Prabakaran, Ponraj
Kitajima, Koji
Uedaira, Hatsuho
Sarai, Akinori
author_sort Kumar, M. D. Shaji
collection PubMed
description ProTherm and ProNIT are two thermodynamic databases that contain experimentally determined thermodynamic parameters of protein stability and protein–nucleic acid interactions, respectively. The current versions of both the databases have considerably increased the total number of entries and enhanced search interface with added new fields, improved search, display and sorting options. As on September 2005, ProTherm release 5.0 contains 17 113 entries from 771 proteins, retrieved from 1497 scientific articles (∼20% increase in data from the previous version). ProNIT release 2.0 contains 4900 entries from 273 research articles, representing 158 proteins. Both databases can be queried using WWW interfaces. Both quick search and advanced search are provided on this web page to facilitate easy retrieval and display of the data from these databases. ProTherm is freely available online at and ProNIT at .
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spelling pubmed-13474652006-01-25 ProTherm and ProNIT: thermodynamic databases for proteins and protein–nucleic acid interactions Kumar, M. D. Shaji Bava, K. Abdulla Gromiha, M. Michael Prabakaran, Ponraj Kitajima, Koji Uedaira, Hatsuho Sarai, Akinori Nucleic Acids Res Article ProTherm and ProNIT are two thermodynamic databases that contain experimentally determined thermodynamic parameters of protein stability and protein–nucleic acid interactions, respectively. The current versions of both the databases have considerably increased the total number of entries and enhanced search interface with added new fields, improved search, display and sorting options. As on September 2005, ProTherm release 5.0 contains 17 113 entries from 771 proteins, retrieved from 1497 scientific articles (∼20% increase in data from the previous version). ProNIT release 2.0 contains 4900 entries from 273 research articles, representing 158 proteins. Both databases can be queried using WWW interfaces. Both quick search and advanced search are provided on this web page to facilitate easy retrieval and display of the data from these databases. ProTherm is freely available online at and ProNIT at . Oxford University Press 2006-01-01 2005-12-28 /pmc/articles/PMC1347465/ /pubmed/16381846 http://dx.doi.org/10.1093/nar/gkj103 Text en © The Author 2006. Published by Oxford University Press. All rights reserved
spellingShingle Article
Kumar, M. D. Shaji
Bava, K. Abdulla
Gromiha, M. Michael
Prabakaran, Ponraj
Kitajima, Koji
Uedaira, Hatsuho
Sarai, Akinori
ProTherm and ProNIT: thermodynamic databases for proteins and protein–nucleic acid interactions
title ProTherm and ProNIT: thermodynamic databases for proteins and protein–nucleic acid interactions
title_full ProTherm and ProNIT: thermodynamic databases for proteins and protein–nucleic acid interactions
title_fullStr ProTherm and ProNIT: thermodynamic databases for proteins and protein–nucleic acid interactions
title_full_unstemmed ProTherm and ProNIT: thermodynamic databases for proteins and protein–nucleic acid interactions
title_short ProTherm and ProNIT: thermodynamic databases for proteins and protein–nucleic acid interactions
title_sort protherm and pronit: thermodynamic databases for proteins and protein–nucleic acid interactions
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1347465/
https://www.ncbi.nlm.nih.gov/pubmed/16381846
http://dx.doi.org/10.1093/nar/gkj103
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