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TiProD: the Tissue-specific Promoter Database
TiProD is a database of human promoter sequences for which some functional features are known. It allows a user to query individual promoters and the expression pattern they mediate, gene expression signatures of individual tissues, and to retrieve sets of promoters according to their tissue-specifi...
Autores principales: | , , , , |
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Formato: | Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2006
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1347475/ https://www.ncbi.nlm.nih.gov/pubmed/16381824 http://dx.doi.org/10.1093/nar/gkj113 |
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author | Chen, Xin Wu, Jian-min Hornischer, Klaus Kel, Alexander Wingender, Edgar |
author_facet | Chen, Xin Wu, Jian-min Hornischer, Klaus Kel, Alexander Wingender, Edgar |
author_sort | Chen, Xin |
collection | PubMed |
description | TiProD is a database of human promoter sequences for which some functional features are known. It allows a user to query individual promoters and the expression pattern they mediate, gene expression signatures of individual tissues, and to retrieve sets of promoters according to their tissue-specific activity or according to individual Gene Ontology terms the corresponding genes are assigned to. We have defined a measure for tissue-specificity that allows the user to discriminate between ubiquitously and specifically expressed genes. The database is accessible at . |
format | Text |
id | pubmed-1347475 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2006 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-13474752006-01-25 TiProD: the Tissue-specific Promoter Database Chen, Xin Wu, Jian-min Hornischer, Klaus Kel, Alexander Wingender, Edgar Nucleic Acids Res Article TiProD is a database of human promoter sequences for which some functional features are known. It allows a user to query individual promoters and the expression pattern they mediate, gene expression signatures of individual tissues, and to retrieve sets of promoters according to their tissue-specific activity or according to individual Gene Ontology terms the corresponding genes are assigned to. We have defined a measure for tissue-specificity that allows the user to discriminate between ubiquitously and specifically expressed genes. The database is accessible at . Oxford University Press 2006-01-01 2005-12-28 /pmc/articles/PMC1347475/ /pubmed/16381824 http://dx.doi.org/10.1093/nar/gkj113 Text en © The Author 2006. Published by Oxford University Press. All rights reserved |
spellingShingle | Article Chen, Xin Wu, Jian-min Hornischer, Klaus Kel, Alexander Wingender, Edgar TiProD: the Tissue-specific Promoter Database |
title | TiProD: the Tissue-specific Promoter Database |
title_full | TiProD: the Tissue-specific Promoter Database |
title_fullStr | TiProD: the Tissue-specific Promoter Database |
title_full_unstemmed | TiProD: the Tissue-specific Promoter Database |
title_short | TiProD: the Tissue-specific Promoter Database |
title_sort | tiprod: the tissue-specific promoter database |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1347475/ https://www.ncbi.nlm.nih.gov/pubmed/16381824 http://dx.doi.org/10.1093/nar/gkj113 |
work_keys_str_mv | AT chenxin tiprodthetissuespecificpromoterdatabase AT wujianmin tiprodthetissuespecificpromoterdatabase AT hornischerklaus tiprodthetissuespecificpromoterdatabase AT kelalexander tiprodthetissuespecificpromoterdatabase AT wingenderedgar tiprodthetissuespecificpromoterdatabase |