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TiProD: the Tissue-specific Promoter Database

TiProD is a database of human promoter sequences for which some functional features are known. It allows a user to query individual promoters and the expression pattern they mediate, gene expression signatures of individual tissues, and to retrieve sets of promoters according to their tissue-specifi...

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Detalles Bibliográficos
Autores principales: Chen, Xin, Wu, Jian-min, Hornischer, Klaus, Kel, Alexander, Wingender, Edgar
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2006
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1347475/
https://www.ncbi.nlm.nih.gov/pubmed/16381824
http://dx.doi.org/10.1093/nar/gkj113
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author Chen, Xin
Wu, Jian-min
Hornischer, Klaus
Kel, Alexander
Wingender, Edgar
author_facet Chen, Xin
Wu, Jian-min
Hornischer, Klaus
Kel, Alexander
Wingender, Edgar
author_sort Chen, Xin
collection PubMed
description TiProD is a database of human promoter sequences for which some functional features are known. It allows a user to query individual promoters and the expression pattern they mediate, gene expression signatures of individual tissues, and to retrieve sets of promoters according to their tissue-specific activity or according to individual Gene Ontology terms the corresponding genes are assigned to. We have defined a measure for tissue-specificity that allows the user to discriminate between ubiquitously and specifically expressed genes. The database is accessible at .
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spelling pubmed-13474752006-01-25 TiProD: the Tissue-specific Promoter Database Chen, Xin Wu, Jian-min Hornischer, Klaus Kel, Alexander Wingender, Edgar Nucleic Acids Res Article TiProD is a database of human promoter sequences for which some functional features are known. It allows a user to query individual promoters and the expression pattern they mediate, gene expression signatures of individual tissues, and to retrieve sets of promoters according to their tissue-specific activity or according to individual Gene Ontology terms the corresponding genes are assigned to. We have defined a measure for tissue-specificity that allows the user to discriminate between ubiquitously and specifically expressed genes. The database is accessible at . Oxford University Press 2006-01-01 2005-12-28 /pmc/articles/PMC1347475/ /pubmed/16381824 http://dx.doi.org/10.1093/nar/gkj113 Text en © The Author 2006. Published by Oxford University Press. All rights reserved
spellingShingle Article
Chen, Xin
Wu, Jian-min
Hornischer, Klaus
Kel, Alexander
Wingender, Edgar
TiProD: the Tissue-specific Promoter Database
title TiProD: the Tissue-specific Promoter Database
title_full TiProD: the Tissue-specific Promoter Database
title_fullStr TiProD: the Tissue-specific Promoter Database
title_full_unstemmed TiProD: the Tissue-specific Promoter Database
title_short TiProD: the Tissue-specific Promoter Database
title_sort tiprod: the tissue-specific promoter database
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1347475/
https://www.ncbi.nlm.nih.gov/pubmed/16381824
http://dx.doi.org/10.1093/nar/gkj113
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