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LMPD: LIPID MAPS proteome database

The LIPID MAPS Proteome Database (LMPD) is an object-relational database of lipid-associated protein sequences and annotations. The initial release contains 2959 records, representing human and mouse proteins involved in lipid metabolism. UniProt IDs were obtained based on keyword search of KEGG and...

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Autores principales: Cotter, Dawn, Maer, Andreia, Guda, Chittibabu, Saunders, Brian, Subramaniam, Shankar
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2006
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1347484/
https://www.ncbi.nlm.nih.gov/pubmed/16381922
http://dx.doi.org/10.1093/nar/gkj122
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author Cotter, Dawn
Maer, Andreia
Guda, Chittibabu
Saunders, Brian
Subramaniam, Shankar
author_facet Cotter, Dawn
Maer, Andreia
Guda, Chittibabu
Saunders, Brian
Subramaniam, Shankar
author_sort Cotter, Dawn
collection PubMed
description The LIPID MAPS Proteome Database (LMPD) is an object-relational database of lipid-associated protein sequences and annotations. The initial release contains 2959 records, representing human and mouse proteins involved in lipid metabolism. UniProt IDs were obtained based on keyword search of KEGG and GO databases, and this LMPD protein list was then enhanced with annotations from UniProt, EntrezGene, ENZYME, GO, KEGG and other public resources. We also assigned associations with general lipid categories, based on GO and KEGG annotations. Users may search LMPD by database ID or keyword, and filter by species and/or lipid class associations; from the search results, one can then access a compilation of data relevant to each protein of interest, cross-linked to external databases. The LIPID MAPS Proteome Database (LMPD) is publicly available from the LIPID MAPS Consortium website (). The direct URL is .
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spelling pubmed-13474842006-01-25 LMPD: LIPID MAPS proteome database Cotter, Dawn Maer, Andreia Guda, Chittibabu Saunders, Brian Subramaniam, Shankar Nucleic Acids Res Article The LIPID MAPS Proteome Database (LMPD) is an object-relational database of lipid-associated protein sequences and annotations. The initial release contains 2959 records, representing human and mouse proteins involved in lipid metabolism. UniProt IDs were obtained based on keyword search of KEGG and GO databases, and this LMPD protein list was then enhanced with annotations from UniProt, EntrezGene, ENZYME, GO, KEGG and other public resources. We also assigned associations with general lipid categories, based on GO and KEGG annotations. Users may search LMPD by database ID or keyword, and filter by species and/or lipid class associations; from the search results, one can then access a compilation of data relevant to each protein of interest, cross-linked to external databases. The LIPID MAPS Proteome Database (LMPD) is publicly available from the LIPID MAPS Consortium website (). The direct URL is . Oxford University Press 2006-01-01 2005-12-28 /pmc/articles/PMC1347484/ /pubmed/16381922 http://dx.doi.org/10.1093/nar/gkj122 Text en © The Author 2006. Published by Oxford University Press. All rights reserved
spellingShingle Article
Cotter, Dawn
Maer, Andreia
Guda, Chittibabu
Saunders, Brian
Subramaniam, Shankar
LMPD: LIPID MAPS proteome database
title LMPD: LIPID MAPS proteome database
title_full LMPD: LIPID MAPS proteome database
title_fullStr LMPD: LIPID MAPS proteome database
title_full_unstemmed LMPD: LIPID MAPS proteome database
title_short LMPD: LIPID MAPS proteome database
title_sort lmpd: lipid maps proteome database
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1347484/
https://www.ncbi.nlm.nih.gov/pubmed/16381922
http://dx.doi.org/10.1093/nar/gkj122
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