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RESOURCERER: a database for annotating and linking microarray resources within and across species
Microarray expression analysis is providing unprecedented data on gene expression in humans and mammalian model systems. Although such studies provide a tremendous resource for understanding human disease states, one of the significant challenges is cross-referencing the data derived from different...
Autores principales: | , , , , , , , , , |
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Formato: | Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2001
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC138985/ https://www.ncbi.nlm.nih.gov/pubmed/16173164 |
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author | Tsai, Jennifer Sultana, Razvan Lee, Yudan Pertea, Geo Karamycheva, Svetlana Antonescu, Valentin Cho, Jennifer Parvizi, Babak Cheung, Foo Quackenbush, John |
author_facet | Tsai, Jennifer Sultana, Razvan Lee, Yudan Pertea, Geo Karamycheva, Svetlana Antonescu, Valentin Cho, Jennifer Parvizi, Babak Cheung, Foo Quackenbush, John |
author_sort | Tsai, Jennifer |
collection | PubMed |
description | Microarray expression analysis is providing unprecedented data on gene expression in humans and mammalian model systems. Although such studies provide a tremendous resource for understanding human disease states, one of the significant challenges is cross-referencing the data derived from different species, across diverse expression analysis platforms, in order to properly derive inferences regarding gene expression and disease state. To address this problem, we have developed RESOURCERER, a microarray-resource annotation and cross-reference database built using the analysis of expressed sequence tags (ESTs) and gene sequences provided by the TIGR Gene Index (TGI) and TIGR Orthologous Gene Alignment (TOGA) databases [now called Eukaryotic Gene Orthologs (EGO)]. |
format | Text |
id | pubmed-138985 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2001 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-1389852003-03-03 RESOURCERER: a database for annotating and linking microarray resources within and across species Tsai, Jennifer Sultana, Razvan Lee, Yudan Pertea, Geo Karamycheva, Svetlana Antonescu, Valentin Cho, Jennifer Parvizi, Babak Cheung, Foo Quackenbush, John Genome Biol Software Report Microarray expression analysis is providing unprecedented data on gene expression in humans and mammalian model systems. Although such studies provide a tremendous resource for understanding human disease states, one of the significant challenges is cross-referencing the data derived from different species, across diverse expression analysis platforms, in order to properly derive inferences regarding gene expression and disease state. To address this problem, we have developed RESOURCERER, a microarray-resource annotation and cross-reference database built using the analysis of expressed sequence tags (ESTs) and gene sequences provided by the TIGR Gene Index (TGI) and TIGR Orthologous Gene Alignment (TOGA) databases [now called Eukaryotic Gene Orthologs (EGO)]. BioMed Central 2001 2001-10-19 /pmc/articles/PMC138985/ /pubmed/16173164 Text en Copyright © 2001 Tsai et al., licensee BioMed Central Ltd |
spellingShingle | Software Report Tsai, Jennifer Sultana, Razvan Lee, Yudan Pertea, Geo Karamycheva, Svetlana Antonescu, Valentin Cho, Jennifer Parvizi, Babak Cheung, Foo Quackenbush, John RESOURCERER: a database for annotating and linking microarray resources within and across species |
title | RESOURCERER: a database for annotating and linking microarray resources within and across species |
title_full | RESOURCERER: a database for annotating and linking microarray resources within and across species |
title_fullStr | RESOURCERER: a database for annotating and linking microarray resources within and across species |
title_full_unstemmed | RESOURCERER: a database for annotating and linking microarray resources within and across species |
title_short | RESOURCERER: a database for annotating and linking microarray resources within and across species |
title_sort | resourcerer: a database for annotating and linking microarray resources within and across species |
topic | Software Report |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC138985/ https://www.ncbi.nlm.nih.gov/pubmed/16173164 |
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