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Identifying repeat domains in large genomes
We present a graph-based method for the analysis of repeat families in a repeat library. We build a repeat domain graph that decomposes a repeat library into repeat domains, short subsequences shared by multiple repeat families, and reveals the mosaic structure of repeat families. Our method recover...
Autores principales: | Zhi, Degui, Raphael, Benjamin J, Price, Alkes L, Tang, Haixu, Pevzner, Pavel A |
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Formato: | Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2006
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1431705/ https://www.ncbi.nlm.nih.gov/pubmed/16507140 http://dx.doi.org/10.1186/gb-2006-7-1-r7 |
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