Genome comparison of two Coccolithoviruses

BACKGROUND: The Coccolithoviridae is a recently discovered family of viruses that infect the marine coccolithophorid Emiliania huxleyi. Following on from the sequencing of the type strain EhV-86, we have sequenced a second strain, EhV-163. RESULTS: We have sequenced approximately 80% of the EhV-163...

Descripción completa

Detalles Bibliográficos
Autores principales: Allen, Michael J, Schroeder, Declan C, Donkin, Andrew, Crawfurd, Katharine J, Wilson, William H
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2006
Materias:
Research
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1440845/
https://www.ncbi.nlm.nih.gov/pubmed/16553948
http://dx.doi.org/10.1186/1743-422X-3-15
_version_ 1782127332250615808
author Allen, Michael J
Schroeder, Declan C
Donkin, Andrew
Crawfurd, Katharine J
Wilson, William H
author_facet Allen, Michael J
Schroeder, Declan C
Donkin, Andrew
Crawfurd, Katharine J
Wilson, William H
author_sort Allen, Michael J
collection PubMed
description BACKGROUND: The Coccolithoviridae is a recently discovered family of viruses that infect the marine coccolithophorid Emiliania huxleyi. Following on from the sequencing of the type strain EhV-86, we have sequenced a second strain, EhV-163. RESULTS: We have sequenced approximately 80% of the EhV-163 genome, equating to more than 200 full length CDSs. Conserved and variable CDSs and a gene replacement have been identified in the EhV-86 and EhV-163 genomes. CONCLUSION: The sequencing of EhV-163 has provided a wealth of information which will aid the re-annotating of the EhV-86 genome and identified a gene insertion in EhV-163.
format Text
id pubmed-1440845
institution National Center for Biotechnology Information
language English
publishDate 2006
publisher BioMed Central
record_format MEDLINE/PubMed
spelling pubmed-14408452006-04-20 Genome comparison of two Coccolithoviruses Allen, Michael J Schroeder, Declan C Donkin, Andrew Crawfurd, Katharine J Wilson, William H Virol J Research BACKGROUND: The Coccolithoviridae is a recently discovered family of viruses that infect the marine coccolithophorid Emiliania huxleyi. Following on from the sequencing of the type strain EhV-86, we have sequenced a second strain, EhV-163. RESULTS: We have sequenced approximately 80% of the EhV-163 genome, equating to more than 200 full length CDSs. Conserved and variable CDSs and a gene replacement have been identified in the EhV-86 and EhV-163 genomes. CONCLUSION: The sequencing of EhV-163 has provided a wealth of information which will aid the re-annotating of the EhV-86 genome and identified a gene insertion in EhV-163. BioMed Central 2006-03-22 /pmc/articles/PMC1440845/ /pubmed/16553948 http://dx.doi.org/10.1186/1743-422X-3-15 Text en Copyright © 2006 Allen et al; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License ( (http://creativecommons.org/licenses/by/2.0) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research
Allen, Michael J
Schroeder, Declan C
Donkin, Andrew
Crawfurd, Katharine J
Wilson, William H
Genome comparison of two Coccolithoviruses
title Genome comparison of two Coccolithoviruses
title_full Genome comparison of two Coccolithoviruses
title_fullStr Genome comparison of two Coccolithoviruses
title_full_unstemmed Genome comparison of two Coccolithoviruses
title_short Genome comparison of two Coccolithoviruses
title_sort genome comparison of two coccolithoviruses
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1440845/
https://www.ncbi.nlm.nih.gov/pubmed/16553948
http://dx.doi.org/10.1186/1743-422X-3-15
work_keys_str_mv AT allenmichaelj genomecomparisonoftwococcolithoviruses
AT schroederdeclanc genomecomparisonoftwococcolithoviruses
AT donkinandrew genomecomparisonoftwococcolithoviruses
AT crawfurdkatharinej genomecomparisonoftwococcolithoviruses
AT wilsonwilliamh genomecomparisonoftwococcolithoviruses

Ejemplares similares