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Quantifying bioirrigation using ecological parameters: a stochastic approach†
Irrigation by benthic macrofauna has a major influence on the biogeochemistry and microbial community structure of sediments. Existing quantitative models of bioirrigation rely primarily on chemical, rather than ecological, information and the depth-dependence of bioirrigation intensity is either im...
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Formato: | Texto |
Lenguaje: | English |
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BioMed Central
2002
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1475616/ https://www.ncbi.nlm.nih.gov/pubmed/35412764 http://dx.doi.org/10.1186/1467-4866-3-17 |
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author | Koretsky, Carla M Meile, Christof Van Cappellen, Philippe |
author_facet | Koretsky, Carla M Meile, Christof Van Cappellen, Philippe |
author_sort | Koretsky, Carla M |
collection | PubMed |
description | Irrigation by benthic macrofauna has a major influence on the biogeochemistry and microbial community structure of sediments. Existing quantitative models of bioirrigation rely primarily on chemical, rather than ecological, information and the depth-dependence of bioirrigation intensity is either imposed or constrained through a data fitting procedure. In this study, stochastic simulations of 3D burrow networks are used to calculate mean densities, volumes and wall surface areas of burrows, as well as their variabilities, as a function of sediment depth. Burrow networks of the following model organisms are considered: the polychaete worms Nereis diversicolor and Schizocardium sp., the shrimp Callianassa subterranea, the echiuran worm Maxmuelleria lankesteri, the fiddler crabs Uca minax, U. pugnax and U. pugilator, and the mud crabs Sesarma reticulatum and Eurytium limosum. Consortia of these model organisms are then used to predict burrow networks in a shallow water carbonate sediment at Dry Tortugas, FL, and in two intertidal saltmarsh sites at Sapelo Island, GA. Solute-specific nonlocal bioirrigation coefficients are calculated from the depth-dependent burrow surface areas and the radial diffusive length scale around the burrows. Bioirrigation coefficients for sulfate obtained from network simulations, with the diffusive length scales constrained by sulfate reduction rate profiles, agree with independent estimates of bioirrigation coefficients based on pore water chemistry. Bioirrigation coefficients for O(2 )derived from the stochastic model, with the diffusion length scales constrained by O(2 )microprofiles measured at the sediment/water interface, are larger than irrigation coefficients based on vertical pore water chemical profiles. This reflects, in part, the rapid attenuation with depth of the O(2 )concentration within the burrows, which reduces the driving force for chemical transfer across the burrow walls. Correction for the depletion of O(2 )in the burrows results in closer agreement between stochastically-derived and chemically-derived irrigation coefficient profiles. |
format | Text |
id | pubmed-1475616 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2002 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-14756162006-06-08 Quantifying bioirrigation using ecological parameters: a stochastic approach† Koretsky, Carla M Meile, Christof Van Cappellen, Philippe Geochem Trans Article Irrigation by benthic macrofauna has a major influence on the biogeochemistry and microbial community structure of sediments. Existing quantitative models of bioirrigation rely primarily on chemical, rather than ecological, information and the depth-dependence of bioirrigation intensity is either imposed or constrained through a data fitting procedure. In this study, stochastic simulations of 3D burrow networks are used to calculate mean densities, volumes and wall surface areas of burrows, as well as their variabilities, as a function of sediment depth. Burrow networks of the following model organisms are considered: the polychaete worms Nereis diversicolor and Schizocardium sp., the shrimp Callianassa subterranea, the echiuran worm Maxmuelleria lankesteri, the fiddler crabs Uca minax, U. pugnax and U. pugilator, and the mud crabs Sesarma reticulatum and Eurytium limosum. Consortia of these model organisms are then used to predict burrow networks in a shallow water carbonate sediment at Dry Tortugas, FL, and in two intertidal saltmarsh sites at Sapelo Island, GA. Solute-specific nonlocal bioirrigation coefficients are calculated from the depth-dependent burrow surface areas and the radial diffusive length scale around the burrows. Bioirrigation coefficients for sulfate obtained from network simulations, with the diffusive length scales constrained by sulfate reduction rate profiles, agree with independent estimates of bioirrigation coefficients based on pore water chemistry. Bioirrigation coefficients for O(2 )derived from the stochastic model, with the diffusion length scales constrained by O(2 )microprofiles measured at the sediment/water interface, are larger than irrigation coefficients based on vertical pore water chemical profiles. This reflects, in part, the rapid attenuation with depth of the O(2 )concentration within the burrows, which reduces the driving force for chemical transfer across the burrow walls. Correction for the depletion of O(2 )in the burrows results in closer agreement between stochastically-derived and chemically-derived irrigation coefficient profiles. BioMed Central 2002-02-20 /pmc/articles/PMC1475616/ /pubmed/35412764 http://dx.doi.org/10.1186/1467-4866-3-17 Text en Copyright © 2002 The Royal Society of Chemistry and the Division of Geochemistry of the American Chemical Society |
spellingShingle | Article Koretsky, Carla M Meile, Christof Van Cappellen, Philippe Quantifying bioirrigation using ecological parameters: a stochastic approach† |
title | Quantifying bioirrigation using ecological parameters: a stochastic approach† |
title_full | Quantifying bioirrigation using ecological parameters: a stochastic approach† |
title_fullStr | Quantifying bioirrigation using ecological parameters: a stochastic approach† |
title_full_unstemmed | Quantifying bioirrigation using ecological parameters: a stochastic approach† |
title_short | Quantifying bioirrigation using ecological parameters: a stochastic approach† |
title_sort | quantifying bioirrigation using ecological parameters: a stochastic approach† |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1475616/ https://www.ncbi.nlm.nih.gov/pubmed/35412764 http://dx.doi.org/10.1186/1467-4866-3-17 |
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