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Animated molecular dynamics simulations of hydrated caesium-smectite interlayers
Computer animation of center of mass coordinates obtained from 800 ps molecular dynamics simulations of Cs-smectite hydrates (1/3 and 2/3 water monolayers) provided information concerning the structure and dynamics of the interlayer region that could not be obtained through traditional simulation an...
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Formato: | Texto |
Lenguaje: | English |
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BioMed Central
2002
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1475617/ https://www.ncbi.nlm.nih.gov/pubmed/35412781 http://dx.doi.org/10.1186/1467-4866-3-73 |
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author | Sutton, Rebecca Sposito, Garrison |
author_facet | Sutton, Rebecca Sposito, Garrison |
author_sort | Sutton, Rebecca |
collection | PubMed |
description | Computer animation of center of mass coordinates obtained from 800 ps molecular dynamics simulations of Cs-smectite hydrates (1/3 and 2/3 water monolayers) provided information concerning the structure and dynamics of the interlayer region that could not be obtained through traditional simulation analysis methods. Cs(+ )formed inner sphere complexes with the mineral surface, and could be seen to jump from one attracting location near a layer charge site to the next, while water molecules were observed to migrate from the hydration shell of one ion to that of another. Neighboring ions maintained a partial hydration shell by sharing water molecules, such that a single water molecule hydrated two ions simultaneously for hundreds of picoseconds. Cs-montmorillonite hydrates featured the largest extent of this sharing interaction, because interlayer ions were able to inhabit positions near surface cavities as well as at their edges, close to oxygen triads. The greater positional freedom of Cs(+ )within the montmorillonite interlayer, a result of structural hydroxyl orientation and low tetrahedral charge, promoted the optimization of distances between cations and water molecules required for water sharing. Preference of Cs(+ )for locations near oxygen triads was observed within interlayer beidellite and hectorite. Water molecules also could be seen to interact directly with the mineral surface, entering its surface cavities to approach attracting charge sites and structural hydroxyls. With increasing water content, water molecules exhibited increased frequency and duration of both cavity habitation and water sharing interactions. Competition between Cs(+ )and water molecules for surface sites was evident. These important cooperative and competitive features of interlayer molecular behavior were uniquely revealed by animation of an otherwise highly complex simulation output. |
format | Text |
id | pubmed-1475617 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2002 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-14756172006-06-08 Animated molecular dynamics simulations of hydrated caesium-smectite interlayers Sutton, Rebecca Sposito, Garrison Geochem Trans Article Computer animation of center of mass coordinates obtained from 800 ps molecular dynamics simulations of Cs-smectite hydrates (1/3 and 2/3 water monolayers) provided information concerning the structure and dynamics of the interlayer region that could not be obtained through traditional simulation analysis methods. Cs(+ )formed inner sphere complexes with the mineral surface, and could be seen to jump from one attracting location near a layer charge site to the next, while water molecules were observed to migrate from the hydration shell of one ion to that of another. Neighboring ions maintained a partial hydration shell by sharing water molecules, such that a single water molecule hydrated two ions simultaneously for hundreds of picoseconds. Cs-montmorillonite hydrates featured the largest extent of this sharing interaction, because interlayer ions were able to inhabit positions near surface cavities as well as at their edges, close to oxygen triads. The greater positional freedom of Cs(+ )within the montmorillonite interlayer, a result of structural hydroxyl orientation and low tetrahedral charge, promoted the optimization of distances between cations and water molecules required for water sharing. Preference of Cs(+ )for locations near oxygen triads was observed within interlayer beidellite and hectorite. Water molecules also could be seen to interact directly with the mineral surface, entering its surface cavities to approach attracting charge sites and structural hydroxyls. With increasing water content, water molecules exhibited increased frequency and duration of both cavity habitation and water sharing interactions. Competition between Cs(+ )and water molecules for surface sites was evident. These important cooperative and competitive features of interlayer molecular behavior were uniquely revealed by animation of an otherwise highly complex simulation output. BioMed Central 2002-09-24 /pmc/articles/PMC1475617/ /pubmed/35412781 http://dx.doi.org/10.1186/1467-4866-3-73 Text en Copyright © 2002 The Royal Society of Chemistry and the Division of Geochemistry of the American Chemical Society |
spellingShingle | Article Sutton, Rebecca Sposito, Garrison Animated molecular dynamics simulations of hydrated caesium-smectite interlayers |
title | Animated molecular dynamics simulations of hydrated caesium-smectite interlayers |
title_full | Animated molecular dynamics simulations of hydrated caesium-smectite interlayers |
title_fullStr | Animated molecular dynamics simulations of hydrated caesium-smectite interlayers |
title_full_unstemmed | Animated molecular dynamics simulations of hydrated caesium-smectite interlayers |
title_short | Animated molecular dynamics simulations of hydrated caesium-smectite interlayers |
title_sort | animated molecular dynamics simulations of hydrated caesium-smectite interlayers |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1475617/ https://www.ncbi.nlm.nih.gov/pubmed/35412781 http://dx.doi.org/10.1186/1467-4866-3-73 |
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