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A joint model for nonparametric functional mapping of longitudinal trajectory and time-to-event

BACKGROUND: The characterization of the relationship between a longitudinal response process and a time-to-event has been a pressing challenge in biostatistical research. This has emerged as an important issue in genetic studies when one attempts to detect the common genes or quantitative trait loci...

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Detalles Bibliográficos
Autores principales: Lin, Min, Wu, Rongling
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2006
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1479376/
https://www.ncbi.nlm.nih.gov/pubmed/16539724
http://dx.doi.org/10.1186/1471-2105-7-138
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author Lin, Min
Wu, Rongling
author_facet Lin, Min
Wu, Rongling
author_sort Lin, Min
collection PubMed
description BACKGROUND: The characterization of the relationship between a longitudinal response process and a time-to-event has been a pressing challenge in biostatistical research. This has emerged as an important issue in genetic studies when one attempts to detect the common genes or quantitative trait loci (QTL) that govern both a longitudinal trajectory and developmental event. RESULTS: We present a joint statistical model for functional mapping of dynamic traits in which the event times and longitudinal traits are taken to depend on a common set of genetic mechanisms. By fitting the Legendre polynomial of orthogonal properties for the time-dependent mean vector, our model does not rely on any curve, which is different from earlier parametric models of functional mapping. This newly developed nonparametric model is demonstrated and validated by an example for a forest tree in which stemwood growth and the time to first flower are jointly modelled. CONCLUSION: Our model allows for the detection of specific QTL that govern both longitudinal traits and developmental processes through either pleiotropic effects or close linkage, or both. This model will have great implications for integrating longitudinal and event data to gain better insights into comprehensive biology and biomedicine.
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spelling pubmed-14793762006-06-19 A joint model for nonparametric functional mapping of longitudinal trajectory and time-to-event Lin, Min Wu, Rongling BMC Bioinformatics Methodology Article BACKGROUND: The characterization of the relationship between a longitudinal response process and a time-to-event has been a pressing challenge in biostatistical research. This has emerged as an important issue in genetic studies when one attempts to detect the common genes or quantitative trait loci (QTL) that govern both a longitudinal trajectory and developmental event. RESULTS: We present a joint statistical model for functional mapping of dynamic traits in which the event times and longitudinal traits are taken to depend on a common set of genetic mechanisms. By fitting the Legendre polynomial of orthogonal properties for the time-dependent mean vector, our model does not rely on any curve, which is different from earlier parametric models of functional mapping. This newly developed nonparametric model is demonstrated and validated by an example for a forest tree in which stemwood growth and the time to first flower are jointly modelled. CONCLUSION: Our model allows for the detection of specific QTL that govern both longitudinal traits and developmental processes through either pleiotropic effects or close linkage, or both. This model will have great implications for integrating longitudinal and event data to gain better insights into comprehensive biology and biomedicine. BioMed Central 2006-03-15 /pmc/articles/PMC1479376/ /pubmed/16539724 http://dx.doi.org/10.1186/1471-2105-7-138 Text en Copyright © 2006 Lin and Wu; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License ( (http://creativecommons.org/licenses/by/2.0) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Methodology Article
Lin, Min
Wu, Rongling
A joint model for nonparametric functional mapping of longitudinal trajectory and time-to-event
title A joint model for nonparametric functional mapping of longitudinal trajectory and time-to-event
title_full A joint model for nonparametric functional mapping of longitudinal trajectory and time-to-event
title_fullStr A joint model for nonparametric functional mapping of longitudinal trajectory and time-to-event
title_full_unstemmed A joint model for nonparametric functional mapping of longitudinal trajectory and time-to-event
title_short A joint model for nonparametric functional mapping of longitudinal trajectory and time-to-event
title_sort joint model for nonparametric functional mapping of longitudinal trajectory and time-to-event
topic Methodology Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1479376/
https://www.ncbi.nlm.nih.gov/pubmed/16539724
http://dx.doi.org/10.1186/1471-2105-7-138
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