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Transcriptional Profiling of Aging in Human Muscle Reveals a Common Aging Signature

We analyzed expression of 81 normal muscle samples from humans of varying ages, and have identified a molecular profile for aging consisting of 250 age-regulated genes. This molecular profile correlates not only with chronological age but also with a measure of physiological age. We compared the tra...

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Autores principales: Zahn, Jacob M, Sonu, Rebecca, Vogel, Hannes, Crane, Emily, Mazan-Mamczarz, Krystyna, Rabkin, Ralph, Davis, Ronald W, Becker, Kevin G, Owen, Art B, Kim, Stuart K
Formato: Texto
Lenguaje:English
Publicado: Public Library of Science 2006
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1513263/
https://www.ncbi.nlm.nih.gov/pubmed/16789832
http://dx.doi.org/10.1371/journal.pgen.0020115
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author Zahn, Jacob M
Sonu, Rebecca
Vogel, Hannes
Crane, Emily
Mazan-Mamczarz, Krystyna
Rabkin, Ralph
Davis, Ronald W
Becker, Kevin G
Owen, Art B
Kim, Stuart K
author_facet Zahn, Jacob M
Sonu, Rebecca
Vogel, Hannes
Crane, Emily
Mazan-Mamczarz, Krystyna
Rabkin, Ralph
Davis, Ronald W
Becker, Kevin G
Owen, Art B
Kim, Stuart K
author_sort Zahn, Jacob M
collection PubMed
description We analyzed expression of 81 normal muscle samples from humans of varying ages, and have identified a molecular profile for aging consisting of 250 age-regulated genes. This molecular profile correlates not only with chronological age but also with a measure of physiological age. We compared the transcriptional profile of muscle aging to previous transcriptional profiles of aging in the kidney and the brain, and found a common signature for aging in these diverse human tissues. The common aging signature consists of six genetic pathways; four pathways increase expression with age (genes in the extracellular matrix, genes involved in cell growth, genes encoding factors involved in complement activation, and genes encoding components of the cytosolic ribosome), while two pathways decrease expression with age (genes involved in chloride transport and genes encoding subunits of the mitochondrial electron transport chain). We also compared transcriptional profiles of aging in humans to those of the mouse and fly, and found that the electron transport chain pathway decreases expression with age in all three organisms, suggesting that this may be a public marker for aging across species.
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spelling pubmed-15132632006-07-24 Transcriptional Profiling of Aging in Human Muscle Reveals a Common Aging Signature Zahn, Jacob M Sonu, Rebecca Vogel, Hannes Crane, Emily Mazan-Mamczarz, Krystyna Rabkin, Ralph Davis, Ronald W Becker, Kevin G Owen, Art B Kim, Stuart K PLoS Genet Research Article We analyzed expression of 81 normal muscle samples from humans of varying ages, and have identified a molecular profile for aging consisting of 250 age-regulated genes. This molecular profile correlates not only with chronological age but also with a measure of physiological age. We compared the transcriptional profile of muscle aging to previous transcriptional profiles of aging in the kidney and the brain, and found a common signature for aging in these diverse human tissues. The common aging signature consists of six genetic pathways; four pathways increase expression with age (genes in the extracellular matrix, genes involved in cell growth, genes encoding factors involved in complement activation, and genes encoding components of the cytosolic ribosome), while two pathways decrease expression with age (genes involved in chloride transport and genes encoding subunits of the mitochondrial electron transport chain). We also compared transcriptional profiles of aging in humans to those of the mouse and fly, and found that the electron transport chain pathway decreases expression with age in all three organisms, suggesting that this may be a public marker for aging across species. Public Library of Science 2006-07 2006-07-21 /pmc/articles/PMC1513263/ /pubmed/16789832 http://dx.doi.org/10.1371/journal.pgen.0020115 Text en This is an open-access article distributed under the terms of the Creative Commons Public Domain declaration which stipulates that, once placed in the public domain, this work may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. https://creativecommons.org/publicdomain/zero/1.0/ This is an open-access article distributed under the terms of the Creative Commons Public Domain declaration, which stipulates that, once placed in the public domain, this work may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose.
spellingShingle Research Article
Zahn, Jacob M
Sonu, Rebecca
Vogel, Hannes
Crane, Emily
Mazan-Mamczarz, Krystyna
Rabkin, Ralph
Davis, Ronald W
Becker, Kevin G
Owen, Art B
Kim, Stuart K
Transcriptional Profiling of Aging in Human Muscle Reveals a Common Aging Signature
title Transcriptional Profiling of Aging in Human Muscle Reveals a Common Aging Signature
title_full Transcriptional Profiling of Aging in Human Muscle Reveals a Common Aging Signature
title_fullStr Transcriptional Profiling of Aging in Human Muscle Reveals a Common Aging Signature
title_full_unstemmed Transcriptional Profiling of Aging in Human Muscle Reveals a Common Aging Signature
title_short Transcriptional Profiling of Aging in Human Muscle Reveals a Common Aging Signature
title_sort transcriptional profiling of aging in human muscle reveals a common aging signature
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1513263/
https://www.ncbi.nlm.nih.gov/pubmed/16789832
http://dx.doi.org/10.1371/journal.pgen.0020115
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