A jumping profile Hidden Markov Model and applications to recombination sites in HIV and HCV genomes

BACKGROUND: Jumping alignments have recently been proposed as a strategy to search a given multiple sequence alignment A against a database. Instead of comparing a database sequence S to the multiple alignment or profile as a whole, S is compared and aligned to individual sequences from A. Within th...

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Detalles Bibliográficos
Autores principales: Schultz, Anne-Kathrin, Zhang, Ming, Leitner, Thomas, Kuiken, Carla, Korber, Bette, Morgenstern, Burkhard, Stanke, Mario
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2006
Materias:
Methodology Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1525204/
https://www.ncbi.nlm.nih.gov/pubmed/16716226
http://dx.doi.org/10.1186/1471-2105-7-265

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1525204/
https://www.ncbi.nlm.nih.gov/pubmed/16716226
http://dx.doi.org/10.1186/1471-2105-7-265

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