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A jumping profile Hidden Markov Model and applications to recombination sites in HIV and HCV genomes
BACKGROUND: Jumping alignments have recently been proposed as a strategy to search a given multiple sequence alignment A against a database. Instead of comparing a database sequence S to the multiple alignment or profile as a whole, S is compared and aligned to individual sequences from A. Within th...
Autores principales: | Schultz, Anne-Kathrin, Zhang, Ming, Leitner, Thomas, Kuiken, Carla, Korber, Bette, Morgenstern, Burkhard, Stanke, Mario |
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Formato: | Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2006
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1525204/ https://www.ncbi.nlm.nih.gov/pubmed/16716226 http://dx.doi.org/10.1186/1471-2105-7-265 |
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