Cargando…
Composite Module Analyst: identification of transcription factor binding site combinations using genetic algorithm
Composite Module Analyst (CMA) is a novel software tool aiming to identify promoter-enhancer models based on the composition of transcription factor (TF) binding sites and their pairs. CMA is closely interconnected with the TRANSFAC(®) database. In particular, CMA uses the positional weight matrix (...
Autores principales: | Waleev, T., Shtokalo, D., Konovalova, T., Voss, N., Cheremushkin, E., Stegmaier, P., Kel-Margoulis, O., Wingender, E., Kel, A. |
---|---|
Formato: | Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2006
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1538785/ https://www.ncbi.nlm.nih.gov/pubmed/16845066 http://dx.doi.org/10.1093/nar/gkl342 |
Ejemplares similares
-
Beyond microarrays: Finding key transcription factors controlling signal transduction pathways
por: Kel, Alexdander, et al.
Publicado: (2006) -
Multi-omics “upstream analysis” of regulatory genomic regions helps identifying targets against methotrexate resistance of colon cancer
por: Kel, Alexander E., et al.
Publicado: (2016) -
TRANSFAC(®) and its module TRANSCompel(®): transcriptional gene regulation in eukaryotes
por: Matys, V., et al.
Publicado: (2006) -
MatrixCatch - a novel tool for the recognition of composite regulatory elements
in promoters
por: Deyneko, Igor V, et al.
Publicado: (2013) -
TRANSPATH(®)—A High Quality Database Focused on Signal Transduction
por: Choi, Claudia, et al.
Publicado: (2004)