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ASGS: an alternative splicing graph web service
Alternative transcript diversity manifests itself a prime cause of complexity in higher eukaryotes. The Alternative Splicing Graph Server (ASGS) is a web service facilitating the systematic study of alternatively spliced genes of higher eukaryotes by generating splicing graphs for the compact visual...
Autores principales: | , , , |
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Formato: | Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2006
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1538904/ https://www.ncbi.nlm.nih.gov/pubmed/16845045 http://dx.doi.org/10.1093/nar/gkl268 |
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author | Bollina, Durgaprasad Lee, Bernett T. K. Tan, Tin Wee Ranganathan, Shoba |
author_facet | Bollina, Durgaprasad Lee, Bernett T. K. Tan, Tin Wee Ranganathan, Shoba |
author_sort | Bollina, Durgaprasad |
collection | PubMed |
description | Alternative transcript diversity manifests itself a prime cause of complexity in higher eukaryotes. The Alternative Splicing Graph Server (ASGS) is a web service facilitating the systematic study of alternatively spliced genes of higher eukaryotes by generating splicing graphs for the compact visual representation of transcript diversity from a single gene. Taking a set of transcripts in General Feature Format as input, ASGS identifies distinct reference and variable exons, generates a transcript splicing graph, an exon summary, splicing events classification and a single line graph to facilitate experimental analysis. This freely available web service can be accessed at . |
format | Text |
id | pubmed-1538904 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2006 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-15389042006-08-18 ASGS: an alternative splicing graph web service Bollina, Durgaprasad Lee, Bernett T. K. Tan, Tin Wee Ranganathan, Shoba Nucleic Acids Res Article Alternative transcript diversity manifests itself a prime cause of complexity in higher eukaryotes. The Alternative Splicing Graph Server (ASGS) is a web service facilitating the systematic study of alternatively spliced genes of higher eukaryotes by generating splicing graphs for the compact visual representation of transcript diversity from a single gene. Taking a set of transcripts in General Feature Format as input, ASGS identifies distinct reference and variable exons, generates a transcript splicing graph, an exon summary, splicing events classification and a single line graph to facilitate experimental analysis. This freely available web service can be accessed at . Oxford University Press 2006-07-01 2006-07-14 /pmc/articles/PMC1538904/ /pubmed/16845045 http://dx.doi.org/10.1093/nar/gkl268 Text en © The Author 2006. Published by Oxford University Press. All rights reserved |
spellingShingle | Article Bollina, Durgaprasad Lee, Bernett T. K. Tan, Tin Wee Ranganathan, Shoba ASGS: an alternative splicing graph web service |
title | ASGS: an alternative splicing graph web service |
title_full | ASGS: an alternative splicing graph web service |
title_fullStr | ASGS: an alternative splicing graph web service |
title_full_unstemmed | ASGS: an alternative splicing graph web service |
title_short | ASGS: an alternative splicing graph web service |
title_sort | asgs: an alternative splicing graph web service |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1538904/ https://www.ncbi.nlm.nih.gov/pubmed/16845045 http://dx.doi.org/10.1093/nar/gkl268 |
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