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Decorin and TGF-β(1 )polymorphisms and development of COPD in a general population
BACKGROUND: Decorin, an extracellular matrix (ECM) proteoglycan, and TGF-β(1 )are both involved in lung ECM turnover. Decorin and TGF-β(1 )expression are decreased respectively increased in COPD lung tissue. Interestingly, they act as each other's feedback regulator. We investigated whether sin...
Autores principales: | , , , , , |
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Formato: | Texto |
Lenguaje: | English |
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BioMed Central
2006
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1539000/ https://www.ncbi.nlm.nih.gov/pubmed/16780585 http://dx.doi.org/10.1186/1465-9921-7-89 |
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author | van Diemen, Cleo C Postma, Dirkje S Vonk, Judith M Bruinenberg, Marcel Nolte, Ilja M Boezen, H Marike |
author_facet | van Diemen, Cleo C Postma, Dirkje S Vonk, Judith M Bruinenberg, Marcel Nolte, Ilja M Boezen, H Marike |
author_sort | van Diemen, Cleo C |
collection | PubMed |
description | BACKGROUND: Decorin, an extracellular matrix (ECM) proteoglycan, and TGF-β(1 )are both involved in lung ECM turnover. Decorin and TGF-β(1 )expression are decreased respectively increased in COPD lung tissue. Interestingly, they act as each other's feedback regulator. We investigated whether single nucleotide polymorphisms (SNPs) in decorin and TGF-β(1 )underlie accelerated decline in FEV(1 )and development of COPD in the general population. METHODS: We genotyped 1390 subjects from the Vlagtwedde/Vlaardingen cohort. Lung function was measured every 3 years for a period of 25 years. We tested whether five SNPs in decorin (3'UTR and four intron SNPs) and three SNPs in TGF-β(1 )(3'UTR rs6957, C-509T rs1800469 and Leu10Pro rs1982073), and their haplotypes, were associated with COPD (last survey GOLD stage = II). Linear mixed effects models were used to analyze genotype associations with FEV(1 )decline. RESULTS: We found a significantly higher prevalence of carriers of the minor allele of the TGF-β(1 )rs6957 SNP (p = 0.001) in subjects with COPD. Additionally, we found a significantly lower prevalence of the haplotype with the major allele of rs6957 and minor alleles for rs1800469 and rs1982073 SNPs in TGF-β(1 )in subjects with COPD (p = 0.030), indicating that this association is due to the rs6957 SNP. TGF-β(1 )SNPs were not associated with FEV(1 )decline. SNPs in decorin, and haplotypes constructed of both TGF-β(1 )and decorin SNPs were not associated with development of COPD or with FEV(1 )decline. CONCLUSION: Our study shows for the first time that SNPs in decorin on its own or in interaction with SNPs in TGF-β(1 )do not underlie the disturbed balance in expression between these genes in COPD. TGF-β(1 )SNPs are associated with COPD, yet not with accelerated FEV(1 )decline in the general population. |
format | Text |
id | pubmed-1539000 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2006 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-15390002006-08-11 Decorin and TGF-β(1 )polymorphisms and development of COPD in a general population van Diemen, Cleo C Postma, Dirkje S Vonk, Judith M Bruinenberg, Marcel Nolte, Ilja M Boezen, H Marike Respir Res Research BACKGROUND: Decorin, an extracellular matrix (ECM) proteoglycan, and TGF-β(1 )are both involved in lung ECM turnover. Decorin and TGF-β(1 )expression are decreased respectively increased in COPD lung tissue. Interestingly, they act as each other's feedback regulator. We investigated whether single nucleotide polymorphisms (SNPs) in decorin and TGF-β(1 )underlie accelerated decline in FEV(1 )and development of COPD in the general population. METHODS: We genotyped 1390 subjects from the Vlagtwedde/Vlaardingen cohort. Lung function was measured every 3 years for a period of 25 years. We tested whether five SNPs in decorin (3'UTR and four intron SNPs) and three SNPs in TGF-β(1 )(3'UTR rs6957, C-509T rs1800469 and Leu10Pro rs1982073), and their haplotypes, were associated with COPD (last survey GOLD stage = II). Linear mixed effects models were used to analyze genotype associations with FEV(1 )decline. RESULTS: We found a significantly higher prevalence of carriers of the minor allele of the TGF-β(1 )rs6957 SNP (p = 0.001) in subjects with COPD. Additionally, we found a significantly lower prevalence of the haplotype with the major allele of rs6957 and minor alleles for rs1800469 and rs1982073 SNPs in TGF-β(1 )in subjects with COPD (p = 0.030), indicating that this association is due to the rs6957 SNP. TGF-β(1 )SNPs were not associated with FEV(1 )decline. SNPs in decorin, and haplotypes constructed of both TGF-β(1 )and decorin SNPs were not associated with development of COPD or with FEV(1 )decline. CONCLUSION: Our study shows for the first time that SNPs in decorin on its own or in interaction with SNPs in TGF-β(1 )do not underlie the disturbed balance in expression between these genes in COPD. TGF-β(1 )SNPs are associated with COPD, yet not with accelerated FEV(1 )decline in the general population. BioMed Central 2006 2006-06-16 /pmc/articles/PMC1539000/ /pubmed/16780585 http://dx.doi.org/10.1186/1465-9921-7-89 Text en Copyright © 2006 van Diemen et al; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License ( (http://creativecommons.org/licenses/by/2.0) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research van Diemen, Cleo C Postma, Dirkje S Vonk, Judith M Bruinenberg, Marcel Nolte, Ilja M Boezen, H Marike Decorin and TGF-β(1 )polymorphisms and development of COPD in a general population |
title | Decorin and TGF-β(1 )polymorphisms and development of COPD in a general population |
title_full | Decorin and TGF-β(1 )polymorphisms and development of COPD in a general population |
title_fullStr | Decorin and TGF-β(1 )polymorphisms and development of COPD in a general population |
title_full_unstemmed | Decorin and TGF-β(1 )polymorphisms and development of COPD in a general population |
title_short | Decorin and TGF-β(1 )polymorphisms and development of COPD in a general population |
title_sort | decorin and tgf-β(1 )polymorphisms and development of copd in a general population |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1539000/ https://www.ncbi.nlm.nih.gov/pubmed/16780585 http://dx.doi.org/10.1186/1465-9921-7-89 |
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