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GoMiner: a resource for biological interpretation of genomic and proteomic data
We have developed GoMiner, a program package that organizes lists of 'interesting' genes (for example, under- and overexpressed genes from a microarray experiment) for biological interpretation in the context of the Gene Ontology. GoMiner provides quantitative and statistical output files...
| Autores principales: | , , , , , , , , , , , , , |
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| Formato: | Texto |
| Lenguaje: | English |
| Publicado: |
BioMed Central
2003
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| Materias: | |
| Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC154579/ https://www.ncbi.nlm.nih.gov/pubmed/12702209 http://dx.doi.org/10.1186/gb-2003-4-4-r28 |
| _version_ | 1782120754154831872 |
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| author | Zeeberg, Barry R Feng, Weimin Wang, Geoffrey Wang, May D Fojo, Anthony T Sunshine, Margot Narasimhan, Sudarshan Kane, David W Reinhold, William C Lababidi, Samir Bussey, Kimberly J Riss, Joseph Barrett, J Carl Weinstein, John N |
| author_facet | Zeeberg, Barry R Feng, Weimin Wang, Geoffrey Wang, May D Fojo, Anthony T Sunshine, Margot Narasimhan, Sudarshan Kane, David W Reinhold, William C Lababidi, Samir Bussey, Kimberly J Riss, Joseph Barrett, J Carl Weinstein, John N |
| author_sort | Zeeberg, Barry R |
| collection | PubMed |
| description | We have developed GoMiner, a program package that organizes lists of 'interesting' genes (for example, under- and overexpressed genes from a microarray experiment) for biological interpretation in the context of the Gene Ontology. GoMiner provides quantitative and statistical output files and two useful visualizations. The first is a tree-like structure analogous to that in the AmiGO browser and the second is a compact, dynamically interactive 'directed acyclic graph'. Genes displayed in GoMiner are linked to major public bioinformatics resources. |
| format | Text |
| id | pubmed-154579 |
| institution | National Center for Biotechnology Information |
| language | English |
| publishDate | 2003 |
| publisher | BioMed Central |
| record_format | MEDLINE/PubMed |
| spelling | pubmed-1545792003-05-08 GoMiner: a resource for biological interpretation of genomic and proteomic data Zeeberg, Barry R Feng, Weimin Wang, Geoffrey Wang, May D Fojo, Anthony T Sunshine, Margot Narasimhan, Sudarshan Kane, David W Reinhold, William C Lababidi, Samir Bussey, Kimberly J Riss, Joseph Barrett, J Carl Weinstein, John N Genome Biol Software We have developed GoMiner, a program package that organizes lists of 'interesting' genes (for example, under- and overexpressed genes from a microarray experiment) for biological interpretation in the context of the Gene Ontology. GoMiner provides quantitative and statistical output files and two useful visualizations. The first is a tree-like structure analogous to that in the AmiGO browser and the second is a compact, dynamically interactive 'directed acyclic graph'. Genes displayed in GoMiner are linked to major public bioinformatics resources. BioMed Central 2003 2003-03-25 /pmc/articles/PMC154579/ /pubmed/12702209 http://dx.doi.org/10.1186/gb-2003-4-4-r28 Text en Copyright © 2003 Zeeberg et al.; licensee BioMed Central Ltd. This is an Open Access article: verbatim copying and redistribution of this article are permitted in all media for any purpose, provided this notice is preserved along with the article's original URL. |
| spellingShingle | Software Zeeberg, Barry R Feng, Weimin Wang, Geoffrey Wang, May D Fojo, Anthony T Sunshine, Margot Narasimhan, Sudarshan Kane, David W Reinhold, William C Lababidi, Samir Bussey, Kimberly J Riss, Joseph Barrett, J Carl Weinstein, John N GoMiner: a resource for biological interpretation of genomic and proteomic data |
| title | GoMiner: a resource for biological interpretation of genomic and proteomic data |
| title_full | GoMiner: a resource for biological interpretation of genomic and proteomic data |
| title_fullStr | GoMiner: a resource for biological interpretation of genomic and proteomic data |
| title_full_unstemmed | GoMiner: a resource for biological interpretation of genomic and proteomic data |
| title_short | GoMiner: a resource for biological interpretation of genomic and proteomic data |
| title_sort | gominer: a resource for biological interpretation of genomic and proteomic data |
| topic | Software |
| url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC154579/ https://www.ncbi.nlm.nih.gov/pubmed/12702209 http://dx.doi.org/10.1186/gb-2003-4-4-r28 |
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