Cargando…
Incorporating background frequency improves entropy-based residue conservation measures
BACKGROUND: Several entropy-based methods have been developed for scoring sequence conservation in protein multiple sequence alignments. High scoring amino acid positions may correlate with structurally or functionally important residues. However, amino acid background frequencies are usually not ta...
Autores principales: | Wang, Kai, Samudrala, Ram |
---|---|
Formato: | Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2006
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1562451/ https://www.ncbi.nlm.nih.gov/pubmed/16916457 http://dx.doi.org/10.1186/1471-2105-7-385 |
Ejemplares similares
-
LePrimAlign: local entropy-based alignment of PPI networks to predict conserved modules
por: Maskey, Sawal, et al.
Publicado: (2019) -
H2r: Identification of evolutionary important residues by means of an entropy based analysis of multiple sequence alignments
por: Merkl, Rainer, et al.
Publicado: (2008) -
Incorporation of non-natural nucleotides into template-switching oligonucleotides reduces background and improves cDNA synthesis from very small RNA samples
por: Kapteyn, Jeremy, et al.
Publicado: (2010) -
c-REDUCE: Incorporating sequence conservation to detect motifs that correlate with expression
por: Kechris, Katerina, et al.
Publicado: (2008) -
H2rs: Deducing evolutionary and functionally important residue positions by means of an entropy and similarity based analysis of multiple sequence alignments
por: Janda, Jan-Oliver, et al.
Publicado: (2014)