Efficient pairwise RNA structure prediction and alignment using sequence alignment constraints

BACKGROUND: We are interested in the problem of predicting secondary structure for small sets of homologous RNAs, by incorporating limited comparative sequence information into an RNA folding model. The Sankoff algorithm for simultaneous RNA folding and alignment is a basis for approaches to this pr...

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Detalles Bibliográficos
Autores principales: Dowell, Robin D, Eddy, Sean R
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2006
Materias:
Methodology Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1579236/
https://www.ncbi.nlm.nih.gov/pubmed/16952317
http://dx.doi.org/10.1186/1471-2105-7-400

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1579236/
https://www.ncbi.nlm.nih.gov/pubmed/16952317
http://dx.doi.org/10.1186/1471-2105-7-400

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