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The gene of an archaeal α-l-fucosidase is expressed by translational frameshifting

The standard rules of genetic translational decoding are altered in specific genes by different events that are globally termed recoding. In Archaea recoding has been unequivocally determined so far only for termination codon readthrough events. We study here the mechanism of expression of a gene en...

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Autores principales: Cobucci-Ponzano, Beatrice, Conte, Fiorella, Benelli, Dario, Londei, Paola, Flagiello, Angela, Monti, Maria, Pucci, Piero, Rossi, Mosè, Moracci, Marco
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2006
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1616953/
https://www.ncbi.nlm.nih.gov/pubmed/16920738
http://dx.doi.org/10.1093/nar/gkl574
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author Cobucci-Ponzano, Beatrice
Conte, Fiorella
Benelli, Dario
Londei, Paola
Flagiello, Angela
Monti, Maria
Pucci, Piero
Rossi, Mosè
Moracci, Marco
author_facet Cobucci-Ponzano, Beatrice
Conte, Fiorella
Benelli, Dario
Londei, Paola
Flagiello, Angela
Monti, Maria
Pucci, Piero
Rossi, Mosè
Moracci, Marco
author_sort Cobucci-Ponzano, Beatrice
collection PubMed
description The standard rules of genetic translational decoding are altered in specific genes by different events that are globally termed recoding. In Archaea recoding has been unequivocally determined so far only for termination codon readthrough events. We study here the mechanism of expression of a gene encoding for a α-l-fucosidase from the archaeon Sulfolobus solfataricus (fucA1), which is split in two open reading frames separated by a −1 frameshifting. The expression in Escherichia coli of the wild-type split gene led to the production by frameshifting of full-length polypeptides with an efficiency of 5%. Mutations in the regulatory site where the shift takes place demonstrate that the expression in vivo occurs in a programmed way. Further, we identify a full-length product of fucA1 in S.solfataricus extracts, which translate this gene in vitro by following programmed −1 frameshifting. This is the first experimental demonstration that this kind of recoding is present in Archaea.
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spelling pubmed-16169532006-10-27 The gene of an archaeal α-l-fucosidase is expressed by translational frameshifting Cobucci-Ponzano, Beatrice Conte, Fiorella Benelli, Dario Londei, Paola Flagiello, Angela Monti, Maria Pucci, Piero Rossi, Mosè Moracci, Marco Nucleic Acids Res Molecular Biology The standard rules of genetic translational decoding are altered in specific genes by different events that are globally termed recoding. In Archaea recoding has been unequivocally determined so far only for termination codon readthrough events. We study here the mechanism of expression of a gene encoding for a α-l-fucosidase from the archaeon Sulfolobus solfataricus (fucA1), which is split in two open reading frames separated by a −1 frameshifting. The expression in Escherichia coli of the wild-type split gene led to the production by frameshifting of full-length polypeptides with an efficiency of 5%. Mutations in the regulatory site where the shift takes place demonstrate that the expression in vivo occurs in a programmed way. Further, we identify a full-length product of fucA1 in S.solfataricus extracts, which translate this gene in vitro by following programmed −1 frameshifting. This is the first experimental demonstration that this kind of recoding is present in Archaea. Oxford University Press 2006-09 2006-08-18 /pmc/articles/PMC1616953/ /pubmed/16920738 http://dx.doi.org/10.1093/nar/gkl574 Text en © 2006 The Author(s)
spellingShingle Molecular Biology
Cobucci-Ponzano, Beatrice
Conte, Fiorella
Benelli, Dario
Londei, Paola
Flagiello, Angela
Monti, Maria
Pucci, Piero
Rossi, Mosè
Moracci, Marco
The gene of an archaeal α-l-fucosidase is expressed by translational frameshifting
title The gene of an archaeal α-l-fucosidase is expressed by translational frameshifting
title_full The gene of an archaeal α-l-fucosidase is expressed by translational frameshifting
title_fullStr The gene of an archaeal α-l-fucosidase is expressed by translational frameshifting
title_full_unstemmed The gene of an archaeal α-l-fucosidase is expressed by translational frameshifting
title_short The gene of an archaeal α-l-fucosidase is expressed by translational frameshifting
title_sort gene of an archaeal α-l-fucosidase is expressed by translational frameshifting
topic Molecular Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1616953/
https://www.ncbi.nlm.nih.gov/pubmed/16920738
http://dx.doi.org/10.1093/nar/gkl574
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