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Mechanisms of a ring shaped helicase

Bacteriophage T7 helicase (T7 gene 4 helicase-primase) is a prototypical member of the ring-shaped family of helicases, whose structure and biochemical mechanisms have been studied in detail. T7 helicase assembles into a homohexameric ring that binds single-stranded DNA in its central channel. Using...

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Detalles Bibliográficos
Autores principales: Donmez, Ilker, Patel, Smita S.
Formato: Texto
Lenguaje:English
Publicado: Oxford University Press 2006
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1616965/
https://www.ncbi.nlm.nih.gov/pubmed/16935879
http://dx.doi.org/10.1093/nar/gkl508
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author Donmez, Ilker
Patel, Smita S.
author_facet Donmez, Ilker
Patel, Smita S.
author_sort Donmez, Ilker
collection PubMed
description Bacteriophage T7 helicase (T7 gene 4 helicase-primase) is a prototypical member of the ring-shaped family of helicases, whose structure and biochemical mechanisms have been studied in detail. T7 helicase assembles into a homohexameric ring that binds single-stranded DNA in its central channel. Using RecA-type nucleotide binding and sensing motifs, T7 helicase binds and hydrolyzes several NTPs, among which dTTP supports optimal protein assembly, DNA binding and unwinding activities. During translocation along single stranded DNA, the subunits of the ring go through dTTP hydrolysis cycles one at a time, and this probably occurs also during DNA unwinding. Interestingly, the unwinding speed of T7 helicase is an order of magnitude slower than its translocation rate along single stranded DNA. The slow unwinding rate is greatly stimulated when DNA synthesis by T7 DNA polymerase is coupled to DNA unwinding. Using the T7 helicase as an example, we highlight critical findings and discuss possible mechanisms of helicase action.
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spelling pubmed-16169652006-10-27 Mechanisms of a ring shaped helicase Donmez, Ilker Patel, Smita S. Nucleic Acids Res Survey and Summary Bacteriophage T7 helicase (T7 gene 4 helicase-primase) is a prototypical member of the ring-shaped family of helicases, whose structure and biochemical mechanisms have been studied in detail. T7 helicase assembles into a homohexameric ring that binds single-stranded DNA in its central channel. Using RecA-type nucleotide binding and sensing motifs, T7 helicase binds and hydrolyzes several NTPs, among which dTTP supports optimal protein assembly, DNA binding and unwinding activities. During translocation along single stranded DNA, the subunits of the ring go through dTTP hydrolysis cycles one at a time, and this probably occurs also during DNA unwinding. Interestingly, the unwinding speed of T7 helicase is an order of magnitude slower than its translocation rate along single stranded DNA. The slow unwinding rate is greatly stimulated when DNA synthesis by T7 DNA polymerase is coupled to DNA unwinding. Using the T7 helicase as an example, we highlight critical findings and discuss possible mechanisms of helicase action. Oxford University Press 2006-09 2006-08-25 /pmc/articles/PMC1616965/ /pubmed/16935879 http://dx.doi.org/10.1093/nar/gkl508 Text en © 2006 The Author(s)
spellingShingle Survey and Summary
Donmez, Ilker
Patel, Smita S.
Mechanisms of a ring shaped helicase
title Mechanisms of a ring shaped helicase
title_full Mechanisms of a ring shaped helicase
title_fullStr Mechanisms of a ring shaped helicase
title_full_unstemmed Mechanisms of a ring shaped helicase
title_short Mechanisms of a ring shaped helicase
title_sort mechanisms of a ring shaped helicase
topic Survey and Summary
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1616965/
https://www.ncbi.nlm.nih.gov/pubmed/16935879
http://dx.doi.org/10.1093/nar/gkl508
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